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PRPF38A pre-mRNA processing factor 38A [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 713344, updated on 17-Aug-2024

Summary

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Official Symbol
PRPF38Aprovided by VGNC
Official Full Name
pre-mRNA processing factor 38Aprovided by VGNC
Primary source
VGNC:VGNC:97810
See related
Ensembl:ENSMMUG00000014333
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PRPF38A in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (172041937..172054950, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (51987409..52000556)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene glutathione peroxidase 7 Neighboring gene terminal uridylyl transferase 4 Neighboring gene small nucleolar RNA U13 Neighboring gene origin recognition complex subunit 1 Neighboring gene coiled-coil and C2 domain containing 1B Neighboring gene zinc finger FYVE-type containing 9 Neighboring gene anaphase-promoting complex subunit 10 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pre-mRNA-splicing factor 38A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    172041937..172054950 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015139795.1 → XP_014995281.1  pre-mRNA-splicing factor 38A isoform X1

    UniProtKB/TrEMBL
    F7CZ30, H9EQH0
    Related
    ENSMMUP00000018825.4, ENSMMUT00000020113.4
    Conserved Domains (1) summary
    pfam03371
    Location:10 → 172
    PRP38; PRP38 family

  2. XM_015139798.2 → XP_014995284.1  pre-mRNA-splicing factor 38A isoform X2

    UniProtKB/TrEMBL
    F7CZ30
    Conserved Domains (1) summary
    pfam03371
    Location:11 → 138
    PRP38; PRP38 family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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