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PLSCR1 phospholipid scramblase 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 713232, updated on 9-Nov-2023

Summary

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Gene symbol
PLSCR1
Gene description
phospholipid scramblase 1
See related
Ensembl:ENSMMUG00000021755
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
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Genomic context

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See PLSCR1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (48639918..48668727, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (155226719..155258060)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene phospholipid scramblase 1-like Neighboring gene phospholipid scramblase 2 Neighboring gene U6 spliceosomal RNA Neighboring gene phospholipid scramblase family member 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phospholipid scramblase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in plasma membrane phospholipid scrambling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipid scramblase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001258077.1 → NP_001245006.1  phospholipid scramblase 1

    See identical proteins and their annotated locations for NP_001245006.1

    Status: PROVISIONAL

    Source sequence(s)
    JU476033
    UniProtKB/TrEMBL
    A0A1D5QMS6, F7DWS2, G7MJK3, H9ZA71
    Related
    ENSMMUP00000028654.4, ENSMMUT00000030615.4
    Conserved Domains (2) summary
    pfam03803
    Location:98 → 307
    Scramblase; Scramblase
    pfam15822
    Location:6 → 72
    MISS; MAPK-interacting and spindle-stabilizing protein-like

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    48639918..48668727 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028843348.1 → XP_028699181.1  phospholipid scramblase 1 isoform X4

    Conserved Domains (1) summary
    pfam03803
    Location:22 → 226
    Scramblase

  2. XM_015131915.2 → XP_014987401.1  phospholipid scramblase 1 isoform X2

    UniProtKB/TrEMBL
    A0A1D5QMS6, F7DWS2, G7MJK3, H9ZA71
    Conserved Domains (2) summary
    pfam03803
    Location:98 → 307
    Scramblase; Scramblase
    pfam15822
    Location:6 → 72
    MISS; MAPK-interacting and spindle-stabilizing protein-like

  3. XM_028843347.1 → XP_028699180.1  phospholipid scramblase 1 isoform X4

    Conserved Domains (1) summary
    pfam03803
    Location:22 → 226
    Scramblase

  4. XM_015131914.2 → XP_014987400.1  phospholipid scramblase 1 isoform X2

    UniProtKB/TrEMBL
    A0A1D5QMS6, F7DWS2, G7MJK3, H9ZA71
    Related
    ENSMMUP00000049351.2, ENSMMUT00000070987.2
    Conserved Domains (2) summary
    pfam03803
    Location:98 → 307
    Scramblase; Scramblase
    pfam15822
    Location:6 → 72
    MISS; MAPK-interacting and spindle-stabilizing protein-like

  5. XM_028843349.1 → XP_028699182.1  phospholipid scramblase 1 isoform X4

    Conserved Domains (1) summary
    pfam03803
    Location:22 → 226
    Scramblase

  6. XM_028843351.1 → XP_028699184.1  phospholipid scramblase 1 isoform X4

    Conserved Domains (1) summary
    pfam03803
    Location:22 → 226
    Scramblase

  7. XM_028843350.1 → XP_028699183.1  phospholipid scramblase 1 isoform X4

    Conserved Domains (1) summary
    pfam03803
    Location:22 → 226
    Scramblase

  8. XM_028843346.1 → XP_028699179.1  phospholipid scramblase 1 isoform X3

    UniProtKB/TrEMBL
    G7MJK3
    Conserved Domains (2) summary
    pfam03803
    Location:91 → 300
    Scramblase
    pfam15822
    Location:1 → 65
    MISS; MAPK-interacting and spindle-stabilizing protein-like

  9. XM_015131913.2 → XP_014987399.1  phospholipid scramblase 1 isoform X1

    UniProtKB/TrEMBL
    G7MJK3
    Conserved Domains (2) summary
    pfam03803
    Location:105 → 314
    Scramblase; Scramblase
    pfam15822
    Location:13 → 79
    MISS; MAPK-interacting and spindle-stabilizing protein-like
Nucleotide Protein
Heading Accession and Version

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