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SRCAP Snf2 related CREBBP activator protein [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 712944, updated on 17-Aug-2024

Summary

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Official Symbol
SRCAPprovided by VGNC
Official Full Name
Snf2 related CREBBP activator proteinprovided by VGNC
Primary source
VGNC:VGNC:104756
See related
Ensembl:ENSMMUG00000010556
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SRCAP in Genome Data Viewer
Location:
chromosome: 20
Exon count:
39
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (28106404..28154515)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (28504849..28552867)

Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene fibrosin Neighboring gene U6 spliceosomal RNA Neighboring gene FAD-linked sulfhydryl oxidase ERV1 Neighboring gene small nucleolar RNA SNORA30/SNORA37 family Neighboring gene transmembrane protein 265 Neighboring gene phosphorylase kinase catalytic subunit gamma 2 Neighboring gene cilia and flagella associated protein 119

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Swr1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
helicase SRCAP

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041773.1 Reference Mmul_10 Primary Assembly

    Range
    28106404..28154515
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028841412.1 → XP_028697245.1  helicase SRCAP

    UniProtKB/TrEMBL
    F7CUX2, H9FP17, I0FNN6
    Conserved Domains (5) summary
    PHA03247
    Location:1367 → 1862
    PHA03247; large tegument protein UL36; Provisional
    PRK04863
    Location:2254 → 2345
    mukB; cell division protein MukB; Provisional
    pfam07529
    Location:127 → 196
    HSA
    cd18793
    Location:2033 → 2168
    SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
    cd18003
    Location:619 → 841
    DEXQc_SRCAP; DEXH/Q-box helicase domain of SRCAP

  2. XM_028841413.1 → XP_028697246.1  helicase SRCAP

    UniProtKB/TrEMBL
    F7CUX2, H9FP17, I0FNN6
    Conserved Domains (5) summary
    PHA03247
    Location:1367 → 1862
    PHA03247; large tegument protein UL36; Provisional
    PRK04863
    Location:2254 → 2345
    mukB; cell division protein MukB; Provisional
    pfam07529
    Location:127 → 196
    HSA
    cd18793
    Location:2033 → 2168
    SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
    cd18003
    Location:619 → 841
    DEXQc_SRCAP; DEXH/Q-box helicase domain of SRCAP

  3. XM_028841414.1 → XP_028697247.1  helicase SRCAP

    UniProtKB/TrEMBL
    F7CUX2, H9FP17, I0FNN6
    Conserved Domains (5) summary
    PHA03247
    Location:1367 → 1862
    PHA03247; large tegument protein UL36; Provisional
    PRK04863
    Location:2254 → 2345
    mukB; cell division protein MukB; Provisional
    pfam07529
    Location:127 → 196
    HSA
    cd18793
    Location:2033 → 2168
    SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
    cd18003
    Location:619 → 841
    DEXQc_SRCAP; DEXH/Q-box helicase domain of SRCAP

  4. XM_028841415.1 → XP_028697248.1  helicase SRCAP

    UniProtKB/TrEMBL
    F7CUX2, H9FP17, I0FNN6
    Related
    ENSMMUP00000013843.4, ENSMMUT00000014775.4
    Conserved Domains (5) summary
    PHA03247
    Location:1367 → 1862
    PHA03247; large tegument protein UL36; Provisional
    PRK04863
    Location:2254 → 2345
    mukB; cell division protein MukB; Provisional
    pfam07529
    Location:127 → 196
    HSA
    cd18793
    Location:2033 → 2168
    SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
    cd18003
    Location:619 → 841
    DEXQc_SRCAP; DEXH/Q-box helicase domain of SRCAP
Nucleotide Protein
Heading Accession and Version

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