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AJUBA ajuba LIM protein [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 712865, updated on 17-Aug-2024

Summary

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Official Symbol
AJUBAprovided by VGNC
Official Full Name
ajuba LIM proteinprovided by VGNC
Primary source
VGNC:VGNC:69645
Locus tag
EGK_18011
See related
Ensembl:ENSMMUG00000008475
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
JUB
Orthologs
human mouse all
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Genomic context

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See AJUBA in Genome Data Viewer
Location:
chromosome: 7
Exon count:
8
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (84999875..85011797, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (84309478..84322026, complement)

Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene HAUS augmin like complex subunit 4 Neighboring gene uncharacterized LOC106999357 Neighboring gene chromosome 7 C14orf93 homolog Neighboring gene 40S ribosomal protein S3a-like Neighboring gene proteasome 20S subunit beta 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of hippo signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of miRNA-mediated gene silencing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to hypoxia IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LIM domain-containing protein ajuba
Names
jub, ajuba homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041760.1 Reference Mmul_10 Primary Assembly

    Range
    84999875..85011797 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001104222.4 → XP_001104222.1  LIM domain-containing protein ajuba

    See identical proteins and their annotated locations for XP_001104222.1

    UniProtKB/TrEMBL
    A0A1D5RD32, A0A8J8Y0F3, F6THL2, G7MX31
    Related
    ENSMMUP00000058225.2, ENSMMUT00000074457.2
    Conserved Domains (4) summary
    PHA03418
    Location:18 → 103
    PHA03418; hypothetical E4 protein; Provisional
    cd09352
    Location:338 → 391
    LIM1_Ajuba_like; The first LIM domain of Ajuba-like proteins
    cd09355
    Location:403 → 455
    LIM2_Ajuba_like; The second LIM domain of Ajuba-like proteins
    cd09438
    Location:463 → 524
    LIM3_Ajuba_like; The third LIM domain of Ajuba-like proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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