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DENND4C DENN domain containing 4C [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 712447, updated on 17-Aug-2024

Summary

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Official Symbol
DENND4Cprovided by VGNC
Official Full Name
DENN domain containing 4Cprovided by VGNC
Primary source
VGNC:VGNC:71715
See related
Ensembl:ENSMMUG00000004338
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See DENND4C in Genome Data Viewer
Location:
chromosome: 15
Exon count:
37
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (64269031..64417101, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (64620316..64774821, complement)

Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene alkaline ceramidase 2 Neighboring gene 40S ribosomal protein S6 Neighboring gene guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-10 pseudogene Neighboring gene translation initiation factor IF-2-like Neighboring gene 40S ribosomal protein S6-like Neighboring gene perilipin-2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Rab protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DENN domain-containing protein 4C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041768.1 Reference Mmul_10 Primary Assembly

    Range
    64269031..64417101 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015117629.2 → XP_014973115.2  DENN domain-containing protein 4C isoform X1

    UniProtKB/TrEMBL
    A0A5F8AI23, F7HT26
    Conserved Domains (4) summary
    smart00801
    Location:559 → 632
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00800
    Location:192 → 276
    uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
    sd00004
    Location:820 → 849
    PPR; PPR repeat [structural motif]
    pfam02141
    Location:310 → 492
    DENN; DENN (AEX-3) domain

  2. XM_015117632.2 → XP_014973118.2  DENN domain-containing protein 4C isoform X3

    UniProtKB/TrEMBL
    A0A5F7ZSB4, F6XME1
    Related
    ENSMMUP00000005805.4, ENSMMUT00000006166.4
    Conserved Domains (4) summary
    smart00801
    Location:559 → 632
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00800
    Location:192 → 276
    uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
    sd00004
    Location:820 → 849
    PPR; PPR repeat [structural motif]
    pfam02141
    Location:310 → 492
    DENN; DENN (AEX-3) domain

  3. XM_015117633.2 → XP_014973119.2  DENN domain-containing protein 4C isoform X4

    UniProtKB/TrEMBL
    A0A5F8AI23, A0A5F8AI81
    Related
    ENSMMUP00000076678.1, ENSMMUT00000108304.1
    Conserved Domains (4) summary
    smart00801
    Location:559 → 632
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00800
    Location:192 → 276
    uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
    sd00004
    Location:752 → 780
    PPR; PPR repeat [structural motif]
    pfam02141
    Location:310 → 492
    DENN; DENN (AEX-3) domain

  4. XM_015117630.2 → XP_014973116.2  DENN domain-containing protein 4C isoform X1

    UniProtKB/TrEMBL
    A0A5F8AI23, F7HT26
    Related
    ENSMMUP00000039281.3, ENSMMUT00000046240.3
    Conserved Domains (4) summary
    smart00801
    Location:559 → 632
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00800
    Location:192 → 276
    uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
    sd00004
    Location:820 → 849
    PPR; PPR repeat [structural motif]
    pfam02141
    Location:310 → 492
    DENN; DENN (AEX-3) domain

  5. XM_028835135.1 → XP_028690968.1  DENN domain-containing protein 4C isoform X5

    UniProtKB/TrEMBL
    G7NFY0
    Conserved Domains (4) summary
    smart00801
    Location:374 → 447
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00800
    Location:7 → 91
    uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
    sd00004
    Location:635 → 664
    PPR; PPR repeat [structural motif]
    pfam02141
    Location:125 → 307
    DENN; DENN (AEX-3) domain

  6. XM_028835136.1 → XP_028690969.1  DENN domain-containing protein 4C isoform X6

    UniProtKB/TrEMBL
    G7NFY0
    Conserved Domains (4) summary
    smart00801
    Location:323 → 396
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    sd00004
    Location:584 → 613
    PPR; PPR repeat [structural motif]
    pfam02141
    Location:74 → 256
    DENN; DENN (AEX-3) domain
    cl04085
    Location:1 → 40
    uDENN; uDENN domain

  7. XM_015117634.2 → XP_014973120.2  DENN domain-containing protein 4C isoform X7

    UniProtKB/TrEMBL
    G7NFY0
    Conserved Domains (3) summary
    smart00801
    Location:207 → 280
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    sd00004
    Location:468 → 497
    PPR; PPR repeat [structural motif]
    pfam02141
    Location:1 → 140
    DENN; DENN (AEX-3) domain

  8. XM_028835134.1 → XP_028690967.1  DENN domain-containing protein 4C isoform X2

    UniProtKB/TrEMBL
    A0A5F8AI23
    Conserved Domains (4) summary
    smart00801
    Location:559 → 632
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00800
    Location:192 → 276
    uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
    sd00004
    Location:820 → 849
    PPR; PPR repeat [structural motif]
    pfam02141
    Location:310 → 492
    DENN; DENN (AEX-3) domain
Nucleotide Protein
Heading Accession and Version

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