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HPS3 HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 712282, updated on 17-Aug-2024

Summary

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Official Symbol
HPS3provided by VGNC
Official Full Name
HPS3 biogenesis of lysosomal organelles complex 2 subunit 1provided by VGNC
Primary source
VGNC:VGNC:73393
See related
Ensembl:ENSMMUG00000005528
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See HPS3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
17
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (51253476..51297996)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (135761994..135806751)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene glycogenin 1 Neighboring gene helicase like transcription factor Neighboring gene non-histone chromosomal protein HMG-17 pseudogene Neighboring gene ceruloplasmin Neighboring gene ceruloplasmin and hephaestin like 1 Neighboring gene transmembrane 4 L six family member 18

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in organelle organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Hermansky-Pudlak syndrome 3 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    51253476..51297996
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015131786.2 → XP_014987272.1  Hermansky-Pudlak syndrome 3 protein isoform X1

    UniProtKB/TrEMBL
    A0A5F8AHM9, G7MJJ4
    Related
    ENSMMUP00000076489.1, ENSMMUT00000100078.1
    Conserved Domains (3) summary
    pfam14761
    Location:3 → 212
    HPS3_N; Hermansky-Pudlak syndrome 3
    pfam14762
    Location:256 → 639
    HPS3_Mid; Hermansky-Pudlak syndrome 3, middle region
    pfam14763
    Location:653 → 1002
    HPS3_C; Hermansky-Pudlak syndrome 3, C-terminal

  2. XM_028843770.1 → XP_028699603.1  Hermansky-Pudlak syndrome 3 protein isoform X2

    UniProtKB/TrEMBL
    A0A5F8AKT8, G7MJJ4
    Related
    ENSMMUP00000077654.1, ENSMMUT00000092257.1
    Conserved Domains (3) summary
    pfam14761
    Location:3 → 212
    HPS3_N; Hermansky-Pudlak syndrome 3
    pfam14762
    Location:256 → 550
    HPS3_Mid; Hermansky-Pudlak syndrome 3, middle region
    pfam14763
    Location:565 → 914
    HPS3_C; Hermansky-Pudlak syndrome 3, C-terminal

RNA

  1. XR_001443142.2 RNA Sequence

  2. XR_001443144.2 RNA Sequence

  3. XR_003727151.1 RNA Sequence

  4. XR_003727152.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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