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LOC712203 alanyl-tRNA editing protein Aarsd1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 712203, updated on 9-Nov-2023

Summary

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Gene symbol
LOC712203
Gene description
alanyl-tRNA editing protein Aarsd1
See related
Ensembl:ENSMMUG00000014123
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
AARSD1
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Genomic context

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See LOC712203 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (54087794..54101986, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (48815934..48830325, complement)

Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene glucose-6-phosphatase catalytic subunit 1 Neighboring gene small nucleolar RNA SNORA40 Neighboring gene prostaglandin E synthase 3 like Neighboring gene RUN domain containing 1 Neighboring gene ribosomal protein L27

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Ser-tRNA(Ala) hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alanine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in alanyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of translational fidelity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alanyl-tRNA editing protein Aarsd1
Names
alanyl-tRNA synthetase domain containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041769.1 Reference Mmul_10 Primary Assembly

    Range
    54087794..54101986 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028836531.1 → XP_028692364.1  alanyl-tRNA editing protein Aarsd1 isoform X2

    UniProtKB/TrEMBL
    F7BX64
    Conserved Domains (1) summary
    COG2872
    Location:1 → 247
    AlaX; Ser-tRNA(Ala) deacylase AlaX (editing enzyme) [Translation, ribosomal structure and biogenesis]

  2. XM_015119807.2 → XP_014975293.1  alanyl-tRNA editing protein Aarsd1 isoform X1

    UniProtKB/TrEMBL
    F7BX64
    Related
    ENSMMUP00000018903.3, ENSMMUT00000020194.4
    Conserved Domains (2) summary
    COG2872
    Location:1 → 247
    AlaX; Ser-tRNA(Ala) deacylase AlaX (editing enzyme) [Translation, ribosomal structure and biogenesis]
    cl08469
    Location:42 → 230
    tRNA_SAD; Threonyl and Alanyl tRNA synthetase second additional domain

  3. XM_028836532.1 → XP_028692365.1  alanyl-tRNA editing protein Aarsd1 isoform X3

    UniProtKB/TrEMBL
    F7BX64
    Conserved Domains (1) summary
    COG2872
    Location:1 → 247
    AlaX; Ser-tRNA(Ala) deacylase AlaX (editing enzyme) [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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