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LRRTM1 leucine rich repeat transmembrane neuronal 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 712198, updated on 17-Aug-2024

Summary

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Official Symbol
LRRTM1provided by VGNC
Official Full Name
leucine rich repeat transmembrane neuronal 1provided by VGNC
Primary source
VGNC:VGNC:74315
See related
Ensembl:ENSMMUG00000000291
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See LRRTM1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
2
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (28318127..28320493)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (81680092..81682458, complement)

Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain-containing protein 11-like Neighboring gene catenin alpha 2 Neighboring gene leydig cell tumor 10 kDa protein homolog pseudogene Neighboring gene uncharacterized LOC114671921 Neighboring gene uncharacterized LOC114671922 Neighboring gene uncharacterized LOC114671926

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat transmembrane neuronal protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001257467.1 → NP_001244396.1  leucine-rich repeat transmembrane neuronal protein 1 precursor

    See identical proteins and their annotated locations for NP_001244396.1

    Status: PROVISIONAL

    Source sequence(s)
    JU334346
    UniProtKB/TrEMBL
    F7A9X3
    Related
    ENSMMUP00000000393.2, ENSMMUT00000000424.4
    Conserved Domains (3) summary
    COG4886
    Location:75 → 315
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00031
    Location:306 → 318
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:91 → 114
    LRR_RI; leucine-rich repeat [structural motif]

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041766.1 Reference Mmul_10 Primary Assembly

    Range
    28318127..28320493
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028831583.1 → XP_028687416.1  leucine-rich repeat transmembrane neuronal protein 1 isoform X1

    UniProtKB/TrEMBL
    F7A9X3
    Conserved Domains (3) summary
    COG4886
    Location:75 → 315
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00031
    Location:306 → 318
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:91 → 114
    LRR_RI; leucine-rich repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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