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RPH3A rabphilin 3A [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 712197, updated on 17-Aug-2024

Summary

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Official Symbol
RPH3Aprovided by VGNC
Official Full Name
rabphilin 3Aprovided by VGNC
Primary source
VGNC:VGNC:77033
See related
Ensembl:ENSMMUG00000012778
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See RPH3A in Genome Data Viewer
Location:
chromosome: 11
Exon count:
25
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (112290517..112624958)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (112605939..112941848)

Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase non-receptor type 11 Neighboring gene uncharacterized LOC114671076 Neighboring gene 2'-5'-oligoadenylate synthetase 1 Neighboring gene 2'-5'-oligoadenylate synthetase 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Rabphilin 3A: A novel target for the treatment of levodopa-induced dyskinesias. Stanic J, et al. Neurobiol Dis, 2017 Dec. PMID 28823933
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rabphilin-3A
Names
rabphilin 3A homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041764.1 Reference Mmul_10 Primary Assembly

    Range
    112290517..112624958
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015152863.2 → XP_015008349.1  rabphilin-3A isoform X1

    UniProtKB/TrEMBL
    A0A1D5QE65, F7EIE2
    Conserved Domains (4) summary
    cd04035
    Location:393 → 516
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:553 → 685
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PRK07764
    Location:178 → 353
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    cd15762
    Location:92 → 171
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  2. XM_028829928.1 → XP_028685761.1  rabphilin-3A isoform X1

    UniProtKB/TrEMBL
    A0A1D5QE65, F7EIE2
    Related
    ENSMMUP00000016787.4, ENSMMUT00000017926.4
    Conserved Domains (4) summary
    cd04035
    Location:393 → 516
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:553 → 685
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PRK07764
    Location:178 → 353
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    cd15762
    Location:92 → 171
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  3. XM_015152862.2 → XP_015008348.1  rabphilin-3A isoform X1

    UniProtKB/TrEMBL
    A0A1D5QE65, F7EIE2
    Conserved Domains (4) summary
    cd04035
    Location:393 → 516
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:553 → 685
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PRK07764
    Location:178 → 353
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    cd15762
    Location:92 → 171
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  4. XM_015152861.2 → XP_015008347.1  rabphilin-3A isoform X1

    UniProtKB/TrEMBL
    A0A1D5QE65, F7EIE2
    Related
    ENSMMUP00000046334.2, ENSMMUT00000077727.2
    Conserved Domains (4) summary
    cd04035
    Location:393 → 516
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:553 → 685
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PRK07764
    Location:178 → 353
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    cd15762
    Location:92 → 171
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  5. XM_015152867.2 → XP_015008353.1  rabphilin-3A isoform X2

    UniProtKB/TrEMBL
    F7EIE2
    Conserved Domains (3) summary
    cd04035
    Location:393 → 516
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd15762
    Location:92 → 171
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins
    cl14603
    Location:553 → 592
    C2; C2 domain
Nucleotide Protein
Heading Accession and Version

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