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TTC39A tetratricopeptide repeat domain 39A [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 712187, updated on 17-Aug-2024

Summary

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Official Symbol
TTC39Aprovided by VGNC
Official Full Name
tetratricopeptide repeat domain 39Aprovided by VGNC
Primary source
VGNC:VGNC:79160
See related
Ensembl:ENSMMUG00000004564
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See TTC39A in Genome Data Viewer
Location:
chromosome: 1
Exon count:
20
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (173138496..173181811)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (50849152..50892801, complement)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene epidermal growth factor receptor pathway substrate 15 Neighboring gene U6 spliceosomal RNA Neighboring gene 26S proteasome non-ATPase regulatory subunit 7 pseudogene Neighboring gene ring finger protein 11 Neighboring gene small nucleolar RNA U13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetratricopeptide repeat protein 39A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    173138496..173181811
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028833928.1 → XP_028689761.1  tetratricopeptide repeat protein 39A isoform X2

    UniProtKB/TrEMBL
    F6RY30
    Related
    ENSMMUP00000006065.4, ENSMMUT00000006451.4
    Conserved Domains (2) summary
    pfam13424
    Location:466 → 541
    TPR_12; Tetratricopeptide repeat
    pfam10300
    Location:27 → 481
    DUF3808; Protein of unknown function (DUF3808)

  2. XM_002801567.3 → XP_002801613.1  tetratricopeptide repeat protein 39A isoform X3

    UniProtKB/TrEMBL
    F6RY30
    Conserved Domains (2) summary
    pfam13424
    Location:440 → 515
    TPR_12; Tetratricopeptide repeat
    pfam10300
    Location:1 → 455
    DUF3808; Protein of unknown function (DUF3808)

  3. XM_001111084.4 → XP_001111084.1  tetratricopeptide repeat protein 39A isoform X1

    See identical proteins and their annotated locations for XP_001111084.1

    UniProtKB/TrEMBL
    F6RY03, F7GSI7
    Related
    ENSMMUP00000006066.4, ENSMMUT00000006452.4
    Conserved Domains (2) summary
    pfam10300
    Location:29 → 483
    DUF3808; Protein of unknown function (DUF3808)
    pfam13424
    Location:477 → 543
    TPR_12; Tetratricopeptide repeat
Nucleotide Protein
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