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SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 712130, updated on 17-Aug-2024

Summary

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Official Symbol
SMARCD1provided by VGNC
Official Full Name
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1provided by VGNC
Primary source
VGNC:VGNC:77653
See related
Ensembl:ENSMMUG00000006531
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SMARCD1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
13
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (49691062..49706563)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (48368774..48384257)

Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene Rac GTPase activating protein 1 Neighboring gene acid sensing ion channel subunit 1 Neighboring gene uncharacterized protein C12orf62-like Neighboring gene developmental pluripotency-associated protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SWI/SNF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041764.1 Reference Mmul_10 Primary Assembly

    Range
    49691062..49706563
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001111275.4 → XP_001111275.3  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1

    Related
    ENSMMUP00000008602.4, ENSMMUT00000009155.4
    Conserved Domains (3) summary
    smart00151
    Location:420 → 496
    SWIB; SWI complex, BAF60b domains
    COG5531
    Location:336 → 537
    Rsc6; Chromatin remodeling complex protein RSC6, contains SWIB domain [Chromatin structure and dynamics]
    pfam02084
    Location:168 → 227
    Bindin; Bindin

  2. XM_001111166.4 → XP_001111166.3  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X2

    UniProtKB/TrEMBL
    A0A1D5REM3
    Related
    ENSMMUP00000058766.2, ENSMMUT00000059020.2
    Conserved Domains (3) summary
    smart00151
    Location:379 → 455
    SWIB; SWI complex, BAF60b domains
    COG5531
    Location:284 → 496
    Rsc6; Chromatin remodeling complex protein RSC6, contains SWIB domain [Chromatin structure and dynamics]
    pfam02084
    Location:168 → 227
    Bindin; Bindin

  3. XM_001111207.4 → XP_001111207.3  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X3

    UniProtKB/TrEMBL
    F7HTY2
    Related
    ENSMMUP00000008601.4, ENSMMUT00000009154.4
    Conserved Domains (3) summary
    smart00151
    Location:420 → 496
    SWIB; SWI complex, BAF60b domains
    COG5531
    Location:336 → 537
    Rsc6; Chromatin remodeling complex protein RSC6, contains SWIB domain [Chromatin structure and dynamics]
    pfam02084
    Location:168 → 227
    Bindin; Bindin
Nucleotide Protein
Heading Accession and Version

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