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PSD3 pleckstrin and Sec7 domain containing 3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 712115, updated on 17-Aug-2024

Summary

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Official Symbol
PSD3provided by VGNC
Official Full Name
pleckstrin and Sec7 domain containing 3provided by VGNC
Primary source
VGNC:VGNC:84104
See related
Ensembl:ENSMMUG00000016385
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PSD3 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
23
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (18682018..19385126, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (18278106..19037977, complement)

Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114680194 Neighboring gene uncharacterized LOC106999694 Neighboring gene N-acetyltransferase 2 Neighboring gene small nucleolar RNA SNORA62/SNORA6 family Neighboring gene uncharacterized LOC114680196 Neighboring gene uncharacterized LOC114680197 Neighboring gene SH2 domain containing 4A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of ARF protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PH and SEC7 domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041761.1 Reference Mmul_10 Primary Assembly

    Range
    18682018..19385126 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028852422.1 → XP_028708255.1  PH and SEC7 domain-containing protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZXG3, G7N0L1
    Related
    ENSMMUP00000070352.1, ENSMMUT00000101407.1
    Conserved Domains (2) summary
    cd00171
    Location:825 → 979
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13295
    Location:1024 → 1149
    PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

  2. XM_028852423.1 → XP_028708256.1  PH and SEC7 domain-containing protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A5F8A7S9, G7N0L1
    Related
    ENSMMUP00000073017.1, ENSMMUT00000094093.1
    Conserved Domains (2) summary
    cd00171
    Location:581 → 735
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13295
    Location:780 → 905
    PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

  3. XM_015144871.2 → XP_015000357.2  PH and SEC7 domain-containing protein 3 isoform X4

    UniProtKB/TrEMBL
    H9F534
    Conserved Domains (2) summary
    cd00171
    Location:516 → 670
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13295
    Location:715 → 840
    PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

  4. XM_015144870.2 → XP_015000356.2  PH and SEC7 domain-containing protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A5F7ZTF8, H9F534
    Related
    ENSMMUP00000068939.1, ENSMMUT00000102246.1
    Conserved Domains (2) summary
    cd00171
    Location:548 → 702
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13295
    Location:747 → 872
    PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

  5. XM_015144872.2 → XP_015000358.1  PH and SEC7 domain-containing protein 3 isoform X5

    UniProtKB/TrEMBL
    F6PKT2, F6VVD5, F7G2Q6
    Related
    ENSMMUP00000027220.4, ENSMMUT00000029094.4
    Conserved Domains (3) summary
    cd00171
    Location:47 → 201
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13295
    Location:246 → 371
    PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain
    pfam00169
    Location:251 → 359
    PH; PH domain
Nucleotide Protein
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