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LANCL1 LanC like glutathione S-transferase 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 711723, updated on 17-Aug-2024

Summary

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Official Symbol
LANCL1provided by VGNC
Official Full Name
LanC like glutathione S-transferase 1provided by VGNC
Primary source
VGNC:VGNC:104541
Locus tag
EGK_04754
See related
Ensembl:ENSMMUG00000054937
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See LANCL1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
13
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (97742148..97789889, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (92078302..92127428, complement)

Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene ATP synthase subunit f, mitochondrial pseudogene Neighboring gene uncharacterized LOC114671407 Neighboring gene myosin light chain 1 Neighboring gene uncharacterized LOC114671408 Neighboring gene carbamoyl-phosphate synthase 1 Neighboring gene 60S ribosomal protein L31 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptide modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutathione S-transferase LANCL1
Names
LanC like 1
lanC-like protein 1
NP_001245050.1
XP_014966359.1
XP_014966360.1
XP_014966361.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001258121.1 → NP_001245050.1  glutathione S-transferase LANCL1

    See identical proteins and their annotated locations for NP_001245050.1

    Status: PROVISIONAL

    Source sequence(s)
    JU473944
    UniProtKB/TrEMBL
    A0A1D5QU99, A0A1D5R4M4, A0A8J8YEH5, F7B2A9, G7N8T8
    Related
    ENSMMUP00000013789.4, ENSMMUT00000014719.4
    Conserved Domains (2) summary
    cd04794
    Location:62 → 395
    euk_LANCL; Eukaryotic Lanthionine synthetase C-like protein
    cl04955
    Location:1 → 89
    LanC_like; Cyclases involved in the biosynthesis of lantibiotics, and similar proteins

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041765.1 Reference Mmul_10 Primary Assembly

    Range
    97742148..97789889 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015110875.2 → XP_014966361.1  glutathione S-transferase LANCL1 isoform X2

    UniProtKB/TrEMBL
    A0A1D5QU99, A0A1D5R4M4, A0A8J8YEH5, F7B2A9, G7N8T8
    Conserved Domains (2) summary
    cd04794
    Location:62 → 395
    euk_LANCL; Eukaryotic Lanthionine synthetase C-like protein
    cl04955
    Location:1 → 89
    LanC_like; Cyclases involved in the biosynthesis of lantibiotics, and similar proteins

  2. XM_015110873.2 → XP_014966359.1  glutathione S-transferase LANCL1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5QU99
    Conserved Domains (2) summary
    cd04794
    Location:74 → 407
    euk_LANCL; Eukaryotic Lanthionine synthetase C-like protein
    cl04955
    Location:13 → 101
    LanC_like; Cyclases involved in the biosynthesis of lantibiotics, and similar proteins

  3. XM_015110874.2 → XP_014966360.1  glutathione S-transferase LANCL1 isoform X2

    UniProtKB/TrEMBL
    A0A1D5QU99, A0A1D5R4M4, A0A8J8YEH5, F7B2A9, G7N8T8
    Conserved Domains (2) summary
    cd04794
    Location:62 → 395
    euk_LANCL; Eukaryotic Lanthionine synthetase C-like protein
    cl04955
    Location:1 → 89
    LanC_like; Cyclases involved in the biosynthesis of lantibiotics, and similar proteins
Nucleotide Protein
Heading Accession and Version

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