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LCN9 lipocalin 9 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 711643, updated on 17-Aug-2024

Summary

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Official Symbol
LCN9provided by VGNC
Official Full Name
lipocalin 9provided by VGNC
Primary source
VGNC:VGNC:74065
See related
Ensembl:ENSMMUG00000021494
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
ESP17.4
Orthologs
human mouse all
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Genomic context

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See LCN9 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (2596712..2600324, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (2692901..2697529, complement)

Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene potassium sodium-activated channel subfamily T member 1 Neighboring gene uncharacterized LOC114672693 Neighboring gene spermatogenesis and oogenesis specific basic helix-loop-helix 1 Neighboring gene glycosyltransferase 6 domain containing 1 Neighboring gene beta-lactoglobulin-2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
epididymal-specific lipocalin-9

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001171841.1 → NP_001165312.1  epididymal-specific lipocalin-9

    See identical proteins and their annotated locations for NP_001165312.1

    Status: PROVISIONAL

    Source sequence(s)
    AF218046
    UniProtKB/TrEMBL
    D1YSI6
    Related
    ENSMMUP00000073508.1, ENSMMUT00000102197.1
    Conserved Domains (1) summary
    pfam00061
    Location:5 → 145
    Lipocalin; Lipocalin / cytosolic fatty-acid binding protein family

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041768.1 Reference Mmul_10 Primary Assembly

    Range
    2596712..2600324 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015116325.2 → XP_014971811.2  epididymal-specific lipocalin-9 isoform X1

    UniProtKB/TrEMBL
    F7FKD8
    Related
    ENSMMUP00000028314.3, ENSMMUT00000030256.4
    Conserved Domains (1) summary
    pfam00061
    Location:34 → 174
    Lipocalin; Lipocalin / cytosolic fatty-acid binding protein family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials