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GRAMD1C GRAM domain containing 1C [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 711458, updated on 17-Aug-2024

Summary

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Official Symbol
GRAMD1Cprovided by VGNC
Official Full Name
GRAM domain containing 1Cprovided by VGNC
Primary source
VGNC:VGNC:73007
Locus tag
EGK_11303
See related
Ensembl:ENSMMUG00000001943
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See GRAMD1C in Genome Data Viewer
Location:
chromosome: 2
Exon count:
23
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (162316139..162430779, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (34868091..34974262)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 191 Neighboring gene zinc finger DHHC-type palmitoyltransferase 23 Neighboring gene 40S ribosomal protein S16-like Neighboring gene vacuolar protein sorting-associated protein 26A pseudogene Neighboring gene 40S ribosomal protein S10 pseudogene Neighboring gene ATPase H+ transporting V1 subunit A Neighboring gene N-alpha-acetyltransferase 50, NatE catalytic subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sterol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sterol transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular sterol transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-plasma membrane contact site IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein Aster-C
Names
GRAM domain-containing protein 1C
GRAM domain-containing protein 1C-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    162316139..162430779 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028844609.1 → XP_028700442.1  protein Aster-C isoform X3

    Conserved Domains (2) summary
    pfam16016
    Location:198 → 345
    DUF4782; Domain of unknown function (DUF4782)
    cl17171
    Location:1 → 42
    PH-like; Pleckstrin homology-like domain

  2. XM_015129889.2 → XP_014985375.1  protein Aster-C isoform X4

    Conserved Domains (1) summary
    pfam16016
    Location:124 → 270
    DUF4782; Domain of unknown function (DUF4782)

  3. XM_028844608.1 → XP_028700441.1  protein Aster-C isoform X2

    Conserved Domains (2) summary
    cd13220
    Location:70 → 163
    PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam16016
    Location:319 → 466
    DUF4782; Domain of unknown function (DUF4782)

  4. XM_028844605.1 → XP_028700438.1  protein Aster-C isoform X1

    UniProtKB/TrEMBL
    A0A5S6RCU1, A0A8J8YG93, F6TRB7, G7MKC3
    Related
    ENSMMUP00000002599.4, ENSMMUT00000002754.4
    Conserved Domains (2) summary
    cd13220
    Location:80 → 173
    PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam16016
    Location:329 → 476
    DUF4782; Domain of unknown function (DUF4782)

  5. XM_028844606.1 → XP_028700439.1  protein Aster-C isoform X2

    Conserved Domains (2) summary
    cd13220
    Location:70 → 163
    PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam16016
    Location:319 → 466
    DUF4782; Domain of unknown function (DUF4782)
Nucleotide Protein
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