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LOC711432 calponin-2 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 711432, updated on 1-Aug-2024

Summary

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Gene symbol
LOC711432
Gene description
calponin-2
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
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Genomic context

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See LOC711432 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (102051283..102053411)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (102494376..102496518)

Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD77 Neighboring gene ATP-dependent RNA helicase DDX3X pseudogene Neighboring gene tachykinin receptor 3 Neighboring gene uncharacterized LOC106998435 Neighboring gene uncharacterized LOC114678170

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actomyosin structure organization IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calponin-2; LOW QUALITY PROTEIN: calponin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041758.1 Reference Mmul_10 Primary Assembly

    Range
    102051283..102053411
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001110773.4 → XP_001110773.3  LOW QUALITY PROTEIN: calponin-2

    UniProtKB/TrEMBL
    F6Q743
    Conserved Domains (2) summary
    COG5199
    Location:19 → 190
    SCP1; Calponin [Cytoskeleton]
    pfam00402
    Location:206 → 229
    Calponin; Calponin family repeat
Nucleotide Protein
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