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DHX30 DExH-box helicase 30 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 711178, updated on 17-Aug-2024

Summary

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Official Symbol
DHX30provided by VGNC
Official Full Name
DExH-box helicase 30provided by VGNC
Primary source
VGNC:VGNC:71632
Locus tag
EGK_11684
See related
Ensembl:ENSMMUG00000003820
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See DHX30 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
25
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (103819911..103872563)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (94649785..94704674, complement)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene chondroitin sulfate proteoglycan 5 Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 Neighboring gene microRNA mir-1226 Neighboring gene uncharacterized LOC114676343 Neighboring gene microtubule associated protein 4 Neighboring gene 60S ribosomal protein L17 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables G-quadruplex RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent RNA helicase DHX30
Names
DEAH-box helicase 30
putative ATP-dependent RNA helicase DHX30

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    103819911..103872563
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015131067.2 → XP_014986553.1  ATP-dependent RNA helicase DHX30 isoform X4

    UniProtKB/TrEMBL
    F7HRC3
    Conserved Domains (1) summary
    COG1643
    Location:395 → 1044
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

  2. XM_015131069.2 → XP_014986555.1  ATP-dependent RNA helicase DHX30 isoform X2

    UniProtKB/TrEMBL
    A0A5F7ZF45, F7HRB8, I0FG31
    Related
    ENSMMUP00000005088.4, ENSMMUT00000005404.4
    Conserved Domains (1) summary
    COG1643
    Location:384 → 1033
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

  3. XM_015131064.2 → XP_014986550.1  ATP-dependent RNA helicase DHX30 isoform X3

    UniProtKB/TrEMBL
    A0A8J8XJ81, F7HRC3, G7MIR4, H9ENU3
    Related
    ENSMMUP00000066887.1, ENSMMUT00000097199.1
    Conserved Domains (1) summary
    COG1643
    Location:423 → 1072
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

  4. XM_028844073.1 → XP_028699906.1  ATP-dependent RNA helicase DHX30 isoform X5

    UniProtKB/TrEMBL
    F7HRC3
    Conserved Domains (1) summary
    COG1643
    Location:391 → 1040
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

  5. XM_015131066.2 → XP_014986552.1  ATP-dependent RNA helicase DHX30 isoform X3

    UniProtKB/TrEMBL
    A0A8J8XJ81, F7HRC3, G7MIR4, H9ENU3
    Related
    ENSMMUP00000077613.1, ENSMMUT00000104971.1
    Conserved Domains (1) summary
    COG1643
    Location:423 → 1072
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

  6. XM_028844072.1 → XP_028699905.1  ATP-dependent RNA helicase DHX30 isoform X4

    UniProtKB/TrEMBL
    F7HRC3
    Conserved Domains (1) summary
    COG1643
    Location:395 → 1044
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

  7. XM_028844074.1 → XP_028699907.1  ATP-dependent RNA helicase DHX30 isoform X5

    UniProtKB/TrEMBL
    F7HRC3
    Related
    ENSMMUP00000005086.4, ENSMMUT00000005402.4
    Conserved Domains (1) summary
    COG1643
    Location:391 → 1040
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

  8. XM_015131060.2 → XP_014986546.1  ATP-dependent RNA helicase DHX30 isoform X2

    UniProtKB/TrEMBL
    A0A5F7ZF45, F7HRB8, I0FG31
    Related
    ENSMMUP00000063806.1, ENSMMUT00000095545.1
    Conserved Domains (1) summary
    COG1643
    Location:384 → 1033
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

  9. XM_015131061.2 → XP_014986547.1  ATP-dependent RNA helicase DHX30 isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZF45, A0A5F7ZWW4
    Related
    ENSMMUP00000069130.1, ENSMMUT00000105789.1
    Conserved Domains (5) summary
    smart00490
    Location:757 → 856
    HELICc; helicase superfamily c-terminal domain
    smart00487
    Location:509 → 688
    DEXDc; DEAD-like helicases superfamily
    smart00847
    Location:928 → 1011
    HA2; Helicase associated domain (HA2) Add an annotation
    cd00046
    Location:523 → 664
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    pfam07717
    Location:1051 → 1173
    OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold
Nucleotide Protein
Heading Accession and Version

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