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CAB39 calcium binding protein 39 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 711166, updated on 17-Aug-2024

Summary

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Official Symbol
CAB39provided by VGNC
Official Full Name
calcium binding protein 39provided by VGNC
Primary source
VGNC:VGNC:70590
Locus tag
EGK_04880
See related
Ensembl:ENSMMUG00000009793
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See CAB39 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
10
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (118141384..118246251)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (113156383..113261046)

Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene SP100 nuclear antigen Neighboring gene nuclear autoantigen Sp-100-like Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC114671435 Neighboring gene integral membrane protein 2C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine kinase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcium-binding protein 39

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001267016.1 → NP_001253945.1  calcium-binding protein 39

    See identical proteins and their annotated locations for NP_001253945.1

    Status: PROVISIONAL

    Source sequence(s)
    JV045169
    UniProtKB/TrEMBL
    A0A8J8YTA7, F6Y0R1, G7N946
    Related
    ENSMMUP00000012818.2, ENSMMUT00000013678.4
    Conserved Domains (1) summary
    pfam08569
    Location:5 → 334
    Mo25; Mo25-like

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041765.1 Reference Mmul_10 Primary Assembly

    Range
    118141384..118246251
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015111248.2 → XP_014966734.1  calcium-binding protein 39 isoform X1

    UniProtKB/TrEMBL
    A0A8J8YTA7, F6Y0R1, G7N946
    Conserved Domains (1) summary
    pfam08569
    Location:5 → 334
    Mo25; Mo25-like
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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