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SDC4 syndecan 4 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 710914, updated on 17-Aug-2024

Summary

Official Symbol
SDC4provided by VGNC
Official Full Name
syndecan 4provided by VGNC
Primary source
VGNC:VGNC:98441
Locus tag
EGK_02366
See related
Ensembl:ENSMMUG00000048424
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
Syndecan-4
Orthologs
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Genomic context

See SDC4 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (80551311..80573040, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (19119891..19141492)

Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114670487 Neighboring gene matrilin 4 Neighboring gene recombination signal binding protein for immunoglobulin kappa J region like Neighboring gene uncharacterized LOC107000389 Neighboring gene SYS1 golgi trafficking protein Neighboring gene TP53 target 5

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001257434.1NP_001244363.1  syndecan-4 precursor

    See identical proteins and their annotated locations for NP_001244363.1

    Status: PROVISIONAL

    Source sequence(s)
    JU335861
    UniProtKB/TrEMBL
    A0A5F8AQE0, A0A8J8XB75, G7N4Q6, I0FGX1
    Related
    ENSMMUP00000070683.1, ENSMMUT00000084457.1
    Conserved Domains (1) summary
    pfam01034
    Location:139196
    Syndecan; Syndecan domain

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041763.1 Reference Mmul_10 Primary Assembly

    Range
    80551311..80573040 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)