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CSMD2 CUB and Sushi multiple domains 2 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 710468, updated on 17-Aug-2024

Summary

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Official Symbol
CSMD2provided by VGNC
Official Full Name
CUB and Sushi multiple domains 2provided by VGNC
Primary source
VGNC:VGNC:71441
See related
Ensembl:ENSMMUG00000002741
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See CSMD2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
71
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (190464462..191114688)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (32661768..33184048, complement)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114678297 Neighboring gene uncharacterized LOC114673099 Neighboring gene chromosome 1 C1orf94 homolog Neighboring gene uncharacterized LOC106997650 Neighboring gene uncharacterized LOC106997630 Neighboring gene high mobility group box 4 Neighboring gene proteasome subunit alpha type-3-like Neighboring gene zinc finger and SCAN domain containing 20 Neighboring gene uncharacterized LOC114673124 Neighboring gene polyhomeotic homolog 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
CUB and sushi domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    190464462..191114688
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015134758.2 → XP_014990244.2  CUB and sushi domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    F7GQF1
    Conserved Domains (6) summary
    cd00033
    Location:561 → 615
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    smart00032
    Location:179 → 236
    CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
    PHA02927
    Location:2767 → 3007
    PHA02927; secreted complement-binding protein; Provisional
    cd00041
    Location:618 → 725
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    pfam00431
    Location:1485 → 1590
    CUB; CUB domain
    pfam00084
    Location:2292 → 2349
    Sushi; Sushi repeat (SCR repeat)

  2. XM_028836225.1 → XP_028692058.1  CUB and sushi domain-containing protein 2 isoform X3

    UniProtKB/TrEMBL
    F7GQF1
    Conserved Domains (7) summary
    cd00033
    Location:561 → 615
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    smart00032
    Location:179 → 236
    CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
    PHA02927
    Location:2747 → 2987
    PHA02927; secreted complement-binding protein; Provisional
    cd00041
    Location:618 → 725
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    pfam00431
    Location:445 → 553
    CUB; CUB domain
    cl00049
    Location:1485 → 1570
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    pfam00084
    Location:2272 → 2329
    Sushi; Sushi repeat (SCR repeat)

  3. XM_015134767.2 → XP_014990253.2  CUB and sushi domain-containing protein 2 isoform X4

    UniProtKB/TrEMBL
    F7GQF5
    Related
    ENSMMUP00000040438.3, ENSMMUT00000047404.3
    Conserved Domains (6) summary
    cd00033
    Location:1876 → 1932
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    smart00032
    Location:179 → 236
    CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
    PHA02927
    Location:2522 → 2762
    PHA02927; secreted complement-binding protein; Provisional
    cd00041
    Location:373 → 480
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    pfam00431
    Location:1240 → 1345
    CUB; CUB domain
    pfam00084
    Location:2047 → 2104
    Sushi; Sushi repeat (SCR repeat)

  4. XM_028836217.1 → XP_028692050.1  CUB and sushi domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    F7GQF1
    Conserved Domains (6) summary
    cd00033
    Location:561 → 615
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    smart00032
    Location:179 → 236
    CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
    PHA02927
    Location:2767 → 3007
    PHA02927; secreted complement-binding protein; Provisional
    cd00041
    Location:618 → 725
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    pfam00431
    Location:1485 → 1590
    CUB; CUB domain
    pfam00084
    Location:2292 → 2349
    Sushi; Sushi repeat (SCR repeat)

  5. XM_015134762.2 → XP_014990248.2  CUB and sushi domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    F7GQF1, F7HKN4
    Related
    ENSMMUP00000003683.4, ENSMMUT00000003898.4
    Conserved Domains (6) summary
    cd00033
    Location:561 → 615
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    smart00032
    Location:179 → 236
    CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
    PHA02927
    Location:2767 → 3007
    PHA02927; secreted complement-binding protein; Provisional
    cd00041
    Location:618 → 725
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    pfam00431
    Location:1485 → 1590
    CUB; CUB domain
    pfam00084
    Location:2292 → 2349
    Sushi; Sushi repeat (SCR repeat)

  6. XM_015134773.2 → XP_014990259.2  CUB and sushi domain-containing protein 2 isoform X6

    Conserved Domains (6) summary
    cd00033
    Location:561 → 615
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    smart00032
    Location:2121 → 2176
    CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
    PHA02927
    Location:2524 → 2767
    PHA02927; secreted complement-binding protein; Provisional
    cd00041
    Location:618 → 725
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    pfam00431
    Location:1485 → 1590
    CUB; CUB domain
    pfam00084
    Location:2292 → 2349
    Sushi; Sushi repeat (SCR repeat)

  7. XM_028836229.1 → XP_028692062.1  CUB and sushi domain-containing protein 2 isoform X5

    UniProtKB/TrEMBL
    F7GQF1
    Conserved Domains (6) summary
    cd00033
    Location:561 → 615
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    smart00032
    Location:179 → 236
    CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
    PHA02927
    Location:2767 → 3007
    PHA02927; secreted complement-binding protein; Provisional
    cd00041
    Location:618 → 725
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    pfam00431
    Location:1485 → 1590
    CUB; CUB domain
    pfam00084
    Location:2292 → 2349
    Sushi; Sushi repeat (SCR repeat)

  8. XM_028836235.1 → XP_028692068.1  CUB and sushi domain-containing protein 2 isoform X6

    Conserved Domains (6) summary
    cd00033
    Location:561 → 615
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    smart00032
    Location:2121 → 2176
    CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
    PHA02927
    Location:2524 → 2767
    PHA02927; secreted complement-binding protein; Provisional
    cd00041
    Location:618 → 725
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    pfam00431
    Location:1485 → 1590
    CUB; CUB domain
    pfam00084
    Location:2292 → 2349
    Sushi; Sushi repeat (SCR repeat)
Nucleotide Protein
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