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SLX9 SLX9 ribosome biogenesis factor [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 710405, updated on 17-Aug-2024

Summary

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Official Symbol
SLX9provided by VGNC
Official Full Name
SLX9 ribosome biogenesis factorprovided by VGNC
Primary source
VGNC:VGNC:72273
See related
Ensembl:ENSMMUG00000000953
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
FAM207A; C21orf70
Orthologs
human mouse all
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Genomic context

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See SLX9 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (1736464..1774739, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (1728317..1779517, complement)

Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene adenosine deaminase RNA specific B1 Neighboring gene uncharacterized LOC106997216 Neighboring gene uncharacterized protein encoded by LINC01547-like Neighboring gene integrin subunit beta 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of preribosome, small subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein FAM207A
Names
family with sequence similarity 207 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041756.1 Reference Mmul_10 Primary Assembly

    Range
    1736464..1774739 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015132735.2 → XP_014988221.1  protein FAM207A isoform X1

    UniProtKB/TrEMBL
    F7EKK2, H9G123
    Conserved Domains (1) summary
    pfam15341
    Location:84 → 206
    SLX9; Ribosome biogenesis protein SLX9

  2. XM_015132734.2 → XP_014988220.1  protein FAM207A isoform X1

    UniProtKB/TrEMBL
    F7EKK2, H9G123
    Related
    ENSMMUP00000035722.2, ENSMMUT00000042713.3
    Conserved Domains (1) summary
    pfam15341
    Location:84 → 206
    SLX9; Ribosome biogenesis protein SLX9

  3. XM_028845248.1 → XP_028701081.1  protein FAM207A isoform X2

    Conserved Domains (1) summary
    pfam15341
    Location:1 → 114
    SLX9; Ribosome biogenesis protein SLX9

  4. XM_028845247.1 → XP_028701080.1  protein FAM207A isoform X2

    Conserved Domains (1) summary
    pfam15341
    Location:1 → 114
    SLX9; Ribosome biogenesis protein SLX9

  5. XM_028845249.1 → XP_028701082.1  protein FAM207A isoform X2

    Conserved Domains (1) summary
    pfam15341
    Location:1 → 114
    SLX9; Ribosome biogenesis protein SLX9

RNA

  1. XR_003727845.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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