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LGALS8 galectin 8 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 710375, updated on 17-Aug-2024

Summary

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Official Symbol
LGALS8provided by VGNC
Official Full Name
galectin 8provided by VGNC
Primary source
VGNC:VGNC:74258
Locus tag
EGK_02104
See related
Ensembl:ENSMMUG00000015132
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See LGALS8 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (12498117..12529302, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (212889266..212920446)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106995165 Neighboring gene protein LBH pseudogene Neighboring gene HEAT repeat containing 1 Neighboring gene uncharacterized LOC114678800 Neighboring gene alpha-enolase pseudogene Neighboring gene EDAR associated death domain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Form deprivation modulates retinal neurogenesis in primate experimental myopia. Tkatchenko AV, et al. Proc Natl Acad Sci U S A, 2006 Mar 21. PMID 16537371, Free PMC Article
  2. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  3. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galectin-8

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001266745.1 → NP_001253674.1  galectin-8

    See identical proteins and their annotated locations for NP_001253674.1

    Status: PROVISIONAL

    Source sequence(s)
    JV667262
    UniProtKB/TrEMBL
    F6UKX3, F7DWG6
    Related
    ENSMMUP00000068892.1, ENSMMUT00000091871.1
    Conserved Domains (2) summary
    smart00908
    Location:194 → 314
    Gal-bind_lectin; Galactoside-binding lectin
    pfam00337
    Location:18 → 151
    Gal-bind_lectin; Galactoside-binding lectin

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    12498117..12529302 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015126509.2 → XP_014981995.1  galectin-8 isoform X1

    UniProtKB/TrEMBL
    A0A8J8YCN4, F6UL45, F7DWG6, G7MFN3
    Conserved Domains (2) summary
    smart00908
    Location:235 → 355
    Gal-bind_lectin; Galactoside-binding lectin
    pfam00337
    Location:18 → 151
    Gal-bind_lectin; Galactoside-binding lectin

  2. XM_015126513.2 → XP_014981999.1  galectin-8 isoform X1

    UniProtKB/TrEMBL
    A0A8J8YCN4, F6UL45, F7DWG6, G7MFN3
    Related
    ENSMMUP00000063236.1, ENSMMUT00000080679.1
    Conserved Domains (2) summary
    smart00908
    Location:235 → 355
    Gal-bind_lectin; Galactoside-binding lectin
    pfam00337
    Location:18 → 151
    Gal-bind_lectin; Galactoside-binding lectin

  3. XM_028844042.1 → XP_028699875.1  galectin-8 isoform X3

    Conserved Domains (2) summary
    smart00908
    Location:167 → 287
    Gal-bind_lectin; Galactoside-binding lectin
    pfam00337
    Location:18 → 122
    Gal-bind_lectin; Galactoside-binding lectin

  4. XM_028844041.1 → XP_028699874.1  galectin-8 isoform X2

    UniProtKB/TrEMBL
    F7DWG6
    Conserved Domains (2) summary
    smart00908
    Location:208 → 328
    Gal-bind_lectin; Galactoside-binding lectin
    pfam00337
    Location:18 → 122
    Gal-bind_lectin; Galactoside-binding lectin

  5. XM_028844038.1 → XP_028699871.1  galectin-8 isoform X1

    UniProtKB/TrEMBL
    A0A8J8YCN4, F6UL45, F7DWG6, G7MFN3
    Conserved Domains (2) summary
    smart00908
    Location:235 → 355
    Gal-bind_lectin; Galactoside-binding lectin
    pfam00337
    Location:18 → 151
    Gal-bind_lectin; Galactoside-binding lectin
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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