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ZSCAN20 zinc finger and SCAN domain containing 20 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 710291, updated on 17-Aug-2024

Summary

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Official Symbol
ZSCAN20provided by VGNC
Official Full Name
zinc finger and SCAN domain containing 20provided by VGNC
Primary source
VGNC:VGNC:78895
Locus tag
EGK_00530
See related
Ensembl:ENSMMUG00000006389
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ZSCAN20 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (191138523..191167368, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (32605909..32635417)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene CUB and Sushi multiple domains 2 Neighboring gene high mobility group box 4 Neighboring gene proteasome subunit alpha type-3-like Neighboring gene uncharacterized LOC114673124 Neighboring gene polyhomeotic homolog 2 Neighboring gene alpha 1,3-galactosyltransferase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
zinc finger and SCAN domain-containing protein 20

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    191138523..191167368 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028836256.1 → XP_028692089.1  zinc finger and SCAN domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    F7GWX2, G7MIA7
    Conserved Domains (5) summary
    COG5048
    Location:699 → 1033
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:740 → 760
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13837
    Location:483 → 568
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
    cl02581
    Location:226 → 275
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    cl02605
    Location:47 → 139
    SCAN; SCAN oligomerization domain

  2. XM_001107866.4 → XP_001107866.3  zinc finger and SCAN domain-containing protein 20 isoform X2

    UniProtKB/TrEMBL
    G7MIA7
    Conserved Domains (5) summary
    COG5048
    Location:698 → 1032
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:739 → 759
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13837
    Location:482 → 567
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
    cl02581
    Location:226 → 275
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    cl02605
    Location:47 → 139
    SCAN; SCAN oligomerization domain

  3. XM_028836264.1 → XP_028692097.1  zinc finger and SCAN domain-containing protein 20 isoform X3

    UniProtKB/TrEMBL
    F7GQB7, G7MIA7
    Related
    ENSMMUP00000040440.3, ENSMMUT00000047406.3
    Conserved Domains (4) summary
    COG5048
    Location:645 → 979
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:686 → 706
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13837
    Location:429 → 514
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
    cl02605
    Location:47 → 139
    SCAN; SCAN oligomerization domain

  4. XM_015134753.2 → XP_014990239.2  zinc finger and SCAN domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    F7GWX2, G7MIA7
    Related
    ENSMMUP00000008426.3, ENSMMUT00000008962.4
    Conserved Domains (5) summary
    COG5048
    Location:699 → 1033
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:740 → 760
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13837
    Location:483 → 568
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
    cl02581
    Location:226 → 275
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    cl02605
    Location:47 → 139
    SCAN; SCAN oligomerization domain
Nucleotide Protein
Heading Accession and Version

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