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TRIM4 tripartite motif containing 4 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 709962, updated on 17-Aug-2024

Summary

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Official Symbol
TRIM4provided by VGNC
Official Full Name
tripartite motif containing 4provided by VGNC
Primary source
VGNC:VGNC:79021
See related
Ensembl:ENSMMUG00000022502
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human all
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Genomic context

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See TRIM4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (42066149..42093890, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (125399853..125427295, complement)

Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 family 3 subfamily A member 43 Neighboring gene olfactory receptor 2AE1 Neighboring gene uncharacterized LOC106997574 Neighboring gene gap junction protein gamma 3 Neighboring gene alpha-2-glycoprotein 1, zinc-binding

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence Analysis of Macaca mulatta TRIM4 and Its Role in the Interferon Pathway. Zhao M, et al. Front Vet Sci, 2022. PMID 35242838, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase TRIM4
Names
tripartite motif-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041756.1 Reference Mmul_10 Primary Assembly

    Range
    42066149..42093890 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015134414.2 → XP_014989900.2  E3 ubiquitin-protein ligase TRIM4 isoform X1

    UniProtKB/TrEMBL
    A0A1D5QX36, F6YWX6
    Related
    ENSMMUP00000052616.2, ENSMMUT00000064440.2
    Conserved Domains (3) summary
    cd00021
    Location:86 → 123
    BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
    cd15809
    Location:279 → 468
    SPRY_PRY_TRIM4; PRY/SPRY domain in tripartite motif-binding protein 4 (TRIM4), also known as RING finger protein 87 (RNF87)
    cd16590
    Location:9 → 53
    RING-HC_TRIM4_C-IV_like; RING finger, HC subclass, found in tripartite motif-containing proteins, TRIM4, TRIM75, tripartite motif family-like protein 1 (TRIML1) and similar proteins

  2. XM_015134415.2 → XP_014989901.2  E3 ubiquitin-protein ligase TRIM4 isoform X2

    Conserved Domains (2) summary
    cd00021
    Location:86 → 123
    BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
    cd16590
    Location:9 → 53
    RING-HC_TRIM4_C-IV_like; RING finger, HC subclass, found in tripartite motif-containing proteins, TRIM4, TRIM75, tripartite motif family-like protein 1 (TRIML1) and similar proteins
Nucleotide Protein
Heading Accession and Version

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