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SCNM1 sodium channel modifier 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 709922, updated on 17-Aug-2024

Summary

Official Symbol
SCNM1provided by VGNC
Official Full Name
sodium channel modifier 1provided by VGNC
Primary source
VGNC:VGNC:100133
Locus tag
EGK_01253
See related
Ensembl:ENSMMUG00000007900
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
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Genomic context

See SCNM1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (99940548..99945384, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (125659190..125663716)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol-4-phosphate 5-kinase type 1 alpha Neighboring gene vacuolar protein sorting 72 homolog Neighboring gene tropomodulin 4 Neighboring gene LysM domain containing 1 Neighboring gene TNF alpha induced protein 8 like 2 Neighboring gene semaphorin 6C

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in RNA splicing IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001257712.2NP_001244641.1  sodium channel modifier 1

    See identical proteins and their annotated locations for NP_001244641.1

    Status: PROVISIONAL

    Source sequence(s)
    JU322366
    UniProtKB/TrEMBL
    A0A8J8YB23, F6PSF1, G7MDJ8
    Related
    ENSMMUP00000010372.2, ENSMMUT00000011062.4
    Conserved Domains (2) summary
    pfam15803
    Location:4470
    zf-SCNM1; Zinc-finger of sodium channel modifier 1
    pfam15805
    Location:183228
    SCNM1_acidic; Acidic C-terminal region of sodium channel modifier 1 SCNM1

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    99940548..99945384 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015150826.2XP_015006312.1  sodium channel modifier 1 isoform X1

    Conserved Domains (2) summary
    pfam15803
    Location:935
    zf-SCNM1; Zinc-finger of sodium channel modifier 1
    pfam15805
    Location:148193
    SCNM1_acidic; Acidic C-terminal region of sodium channel modifier 1 SCNM1