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ARID5A AT-rich interaction domain 5A [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 709608, updated on 17-Aug-2024

Summary

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Official Symbol
ARID5Aprovided by VGNC
Official Full Name
AT-rich interaction domain 5Aprovided by VGNC
Primary source
VGNC:VGNC:69853
See related
Ensembl:ENSMMUG00000030744
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ARID5A in Genome Data Viewer
Location:
chromosome: 13
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (874764..890543)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (92256427..92274480)

Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene neuralized E3 ubiquitin protein ligase 3 Neighboring gene uncharacterized LOC114671816 Neighboring gene KAT8 regulatory NSL complex subunit 3 Neighboring gene fer-1 like family member 5 Neighboring gene uncharacterized LOC114671864 Neighboring gene lectin, mannose binding 2 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AT-rich interactive domain-containing protein 5A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041766.1 Reference Mmul_10 Primary Assembly

    Range
    874764..890543
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015112880.2 → XP_014968366.2  AT-rich interactive domain-containing protein 5A isoform X1

    UniProtKB/TrEMBL
    A0A5F8AUZ2, I0FLW2
    Related
    ENSMMUP00000081003.1, ENSMMUT00000105375.1
    Conserved Domains (1) summary
    cd16884
    Location:61 → 143
    ARID_ARID5A; ARID/BRIGHT DNA binding domain of AT-rich interactive domain-containing protein 5A (ARID5A) and similar proteins

  2. XM_015112881.2 → XP_014968367.2  AT-rich interactive domain-containing protein 5A isoform X2

    UniProtKB/TrEMBL
    I0FLW2
    Conserved Domains (1) summary
    cl28902
    Location:41 → 79
    ARID; ARID/BRIGHT DNA binding domain family

  3. XM_028832153.1 → XP_028687986.1  AT-rich interactive domain-containing protein 5A isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials