U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

BRF1 BRF1 RNA polymerase III transcription initiation factor subunit [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 709533, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
BRF1provided by VGNC
Official Full Name
BRF1 RNA polymerase III transcription initiation factor subunitprovided by VGNC
Primary source
VGNC:VGNC:84314
See related
Ensembl:ENSMMUG00000029174
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See BRF1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
23
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (167520615..167622398, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (167575518..167655325, complement)

Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene jagged canonical Notch ligand 2 Neighboring gene nudix hydrolase 14 Neighboring gene BTB domain containing 6 Neighboring gene phosphofurin acidic cluster sorting protein 2 Neighboring gene uncharacterized LOC106999596 Neighboring gene testis expressed 22

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase III general transcription initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase III type 3 promoter sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables TBP-class protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription by RNA polymerase III IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription preinitiation complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIIB complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription preinitiation complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transcription factor IIIB 90 kDa subunit
Names
BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit
zinc finger protein 36, C3H type-like 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041760.1 Reference Mmul_10 Primary Assembly

    Range
    167520615..167622398 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028851951.1 → XP_028707784.1  transcription factor IIIB 90 kDa subunit isoform X5

    UniProtKB/TrEMBL
    I0FR63
    Conserved Domains (2) summary
    COG1405
    Location:1 → 151
    SUA7; Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
    pfam07741
    Location:335 → 431
    BRF1; Brf1-like TBP-binding domain

  2. XM_028851950.1 → XP_028707783.1  transcription factor IIIB 90 kDa subunit isoform X4

    UniProtKB/TrEMBL
    I0FR63
    Conserved Domains (2) summary
    COG1405
    Location:1 → 151
    SUA7; Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
    pfam07741
    Location:335 → 453
    BRF1; Brf1-like TBP-binding domain

  3. XM_015144614.2 → XP_015000100.1  transcription factor IIIB 90 kDa subunit isoform X2

    UniProtKB/TrEMBL
    F6RDQ4, H9FTI7, I0FR63
    Related
    ENSMMUP00000032516.3, ENSMMUT00000039431.3
    Conserved Domains (2) summary
    COG1405
    Location:4 → 266
    SUA7; Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
    pfam07741
    Location:450 → 546
    BRF1; Brf1-like TBP-binding domain

  4. XM_028851948.1 → XP_028707781.1  transcription factor IIIB 90 kDa subunit isoform X1

    UniProtKB/TrEMBL
    I0FR63
    Conserved Domains (2) summary
    COG1405
    Location:4 → 278
    SUA7; Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
    pfam07741
    Location:462 → 558
    BRF1; Brf1-like TBP-binding domain

  5. XM_028851949.1 → XP_028707782.1  transcription factor IIIB 90 kDa subunit isoform X3

    UniProtKB/TrEMBL
    I0FR63
    Conserved Domains (2) summary
    COG1405
    Location:4 → 239
    SUA7; Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
    pfam07741
    Location:423 → 519
    BRF1; Brf1-like TBP-binding domain

  6. XM_028851952.1 → XP_028707785.1  transcription factor IIIB 90 kDa subunit isoform X7

    Conserved Domains (1) summary
    pfam07741
    Location:212 → 308
    BRF1; Brf1-like TBP-binding domain

  7. XM_015144618.2 → XP_015000104.1  transcription factor IIIB 90 kDa subunit isoform X6

    Conserved Domains (2) summary
    pfam07741
    Location:246 → 342
    BRF1; Brf1-like TBP-binding domain
    cd20554
    Location:1 → 66
    CYCLIN_TFIIIB90_rpt2; second cyclin box found in transcription factor IIIB 90 kDa subunit (TFIIIB90) and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.