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SBNO1 strawberry notch homolog 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 709260, updated on 17-Aug-2024

Summary

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Official Symbol
SBNO1provided by VGNC
Official Full Name
strawberry notch homolog 1provided by VGNC
Primary source
VGNC:VGNC:77084
Locus tag
EGK_04321
See related
Ensembl:ENSMMUG00000011496
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SBNO1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
33
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (123169802..123255250, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (123300843..123382996, complement)

Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene M-phase phosphoprotein 9 Neighboring gene mitochondrial translation release factor in rescue Neighboring gene cyclin dependent kinase 2 associated protein 1 Neighboring gene lysine methyltransferase 5A Neighboring gene Rab interacting lysosomal protein like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein strawberry notch homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041764.1 Reference Mmul_10 Primary Assembly

    Range
    123169802..123255250 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015109611.2 → XP_014965097.2  protein strawberry notch homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A5K1VKF2
    Conserved Domains (2) summary
    pfam13871
    Location:873 → 1149
    Helicase_C_4; C-terminal domain on Strawberry notch homolog
    pfam13872
    Location:259 → 561
    AAA_34; P-loop containing NTP hydrolase pore-1

  2. XM_015109616.2 → XP_014965102.2  protein strawberry notch homolog 1 isoform X4

    UniProtKB/TrEMBL
    A0A5K1VKF2
    Conserved Domains (2) summary
    pfam13871
    Location:870 → 1146
    Helicase_C_4; C-terminal domain on Strawberry notch homolog
    pfam13872
    Location:256 → 558
    AAA_34; P-loop containing NTP hydrolase pore-1

  3. XM_015109613.2 → XP_014965099.2  protein strawberry notch homolog 1 isoform X2

    UniProtKB/TrEMBL
    A0A5K1VKF2
    Conserved Domains (2) summary
    pfam13871
    Location:872 → 1148
    Helicase_C_4; C-terminal domain on Strawberry notch homolog
    pfam13872
    Location:258 → 560
    AAA_34; P-loop containing NTP hydrolase pore-1

  4. XM_015109614.2 → XP_014965100.2  protein strawberry notch homolog 1 isoform X3

    UniProtKB/TrEMBL
    A0A5K1VKF2
    Conserved Domains (2) summary
    pfam13871
    Location:871 → 1147
    Helicase_C_4; C-terminal domain on Strawberry notch homolog
    pfam13872
    Location:257 → 559
    AAA_34; P-loop containing NTP hydrolase pore-1

  5. XM_028830087.1 → XP_028685920.1  protein strawberry notch homolog 1 isoform X5

    UniProtKB/TrEMBL
    A0A5K1VKF2
    Related
    ENSMMUP00000015087.4, ENSMMUT00000016098.4
    Conserved Domains (2) summary
    pfam13871
    Location:869 → 1145
    Helicase_C_4; C-terminal domain on Strawberry notch homolog
    pfam13872
    Location:255 → 557
    AAA_34; P-loop containing NTP hydrolase pore-1
Nucleotide Protein
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