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paaD 1,2-phenylacetyl-CoA epoxidase subunit PaaD [ Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ]

Gene ID: 70914860, updated on 10-Oct-2024

Summary

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Gene symbol
paaD
Gene description
1,2-phenylacetyl-CoA epoxidase subunit PaaD
Locus tag
PN96_RS18925
Gene type
protein coding
Organism
Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 (strain: ATCC 14048, culture-collection: ATCC:14048, type-material: type strain of Beneckea natriegens)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
Old locus tag
PN96_18670
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Genomic context

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Location:
chromosome: 2

2 - NZ_CP009978.1Genomic Context describing neighboring genes Neighboring gene 1,2-phenylacetyl-CoA epoxidase subunit PaaB Neighboring gene 1,2-phenylacetyl-CoA epoxidase subunit PaaC Neighboring gene 1,2-phenylacetyl-CoA epoxidase subunit PaaE Neighboring gene enoyl-CoA hydratase-related protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP009978.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular characterization of the phenylacetic acid catabolic pathway in Pseudomonas putida U: the phenylacetyl-CoA catabolon. Olivera ER, et al. Proc Natl Acad Sci U S A, 1998 May 26. PMID 9600981, Free PMC Article
  2. Catabolism of phenylacetic acid in Escherichia coli. Characterization of a new aerobic hybrid pathway. Ferrández A, et al. J Biol Chem, 1998 Oct 2. PMID 9748275

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
1,2-phenylacetyl-CoA epoxidase subunit PaaD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP009978.1 Reference assembly

    Range
    856974..857480
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_020334270.1 1,2-phenylacetyl-CoA epoxidase subunit PaaD [Vibrio natriegens]

    UniProtKB/TrEMBL
    A0AAN0Y7J8
    Conserved Domains (1) summary
    TIGR02159
    Location:24 → 168
    PA_CoA_Oxy4; phenylacetate-CoA oxygenase, PaaJ subunit
Nucleotide Protein
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