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ZSCAN25 zinc finger and SCAN domain containing 25 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 709125, updated on 17-Aug-2024

Summary

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Official Symbol
ZSCAN25provided by VGNC
Official Full Name
zinc finger and SCAN domain containing 25provided by VGNC
Primary source
VGNC:VGNC:79344
See related
Ensembl:ENSMMUG00000022728
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
ZNF498
Orthologs
human mouse all
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Genomic context

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See ZSCAN25 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (41723388..41793697)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (125055377..125070770)

Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 655 Neighboring gene transmembrane protein 225B Neighboring gene cytochrome P450, family 3, subfamily A, polypeptide 5 Neighboring gene cytochrome P450 family 3 subfamily A member 7 Neighboring gene uncharacterized LOC114676874 Neighboring gene cytochrome P450 3A7-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in central nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and SCAN domain-containing protein 25
Names
zinc finger protein 498

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001257455.1 → NP_001244384.1  zinc finger and SCAN domain-containing protein 25

    See identical proteins and their annotated locations for NP_001244384.1

    Status: PROVISIONAL

    Source sequence(s)
    JU333410
    UniProtKB/TrEMBL
    A0A1D5QSQ4, F7GIA5
    Conserved Domains (6) summary
    cd07765
    Location:231 → 266
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:324 → 533
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:406 → 426
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:348 → 370
    zf-C2H2; Zinc finger, C2H2 type
    pfam02023
    Location:38 → 123
    SCAN; SCAN domain
    pfam13465
    Location:502 → 526
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041756.1 Reference Mmul_10 Primary Assembly

    Range
    41723388..41793697
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028844976.1 → XP_028700809.1  zinc finger and SCAN domain-containing protein 25 isoform X3

    Conserved Domains (2) summary
    cd07765
    Location:231 → 266
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    pfam02023
    Location:38 → 123
    SCAN; SCAN domain

  2. XM_015134319.2 → XP_014989805.1  zinc finger and SCAN domain-containing protein 25 isoform X1

    UniProtKB/TrEMBL
    A0A1D5QSQ4, F7GIA5
    Related
    ENSMMUP00000051082.2, ENSMMUT00000058636.2
    Conserved Domains (6) summary
    cd07765
    Location:231 → 266
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:324 → 533
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:406 → 426
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:348 → 370
    zf-C2H2; Zinc finger, C2H2 type
    pfam02023
    Location:38 → 123
    SCAN; SCAN domain
    pfam13465
    Location:502 → 526
    zf-H2C2_2; Zinc-finger double domain

  3. XM_015134322.2 → XP_014989808.1  zinc finger and SCAN domain-containing protein 25 isoform X1

    UniProtKB/TrEMBL
    A0A1D5QSQ4, F7GIA5
    Related
    ENSMMUP00000029927.2, ENSMMUT00000031984.4
    Conserved Domains (6) summary
    cd07765
    Location:231 → 266
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:324 → 533
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:406 → 426
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:348 → 370
    zf-C2H2; Zinc finger, C2H2 type
    pfam02023
    Location:38 → 123
    SCAN; SCAN domain
    pfam13465
    Location:502 → 526
    zf-H2C2_2; Zinc-finger double domain

  4. XM_028844975.1 → XP_028700808.1  zinc finger and SCAN domain-containing protein 25 isoform X2

    Conserved Domains (4) summary
    cd07765
    Location:67 → 102
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:160 → 341
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:242 → 262
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:337 → 362
    zf-H2C2_2; Zinc-finger double domain

  5. XM_015134320.2 → XP_014989806.1  zinc finger and SCAN domain-containing protein 25 isoform X1

    UniProtKB/TrEMBL
    A0A1D5QSQ4, F7GIA5
    Conserved Domains (6) summary
    cd07765
    Location:231 → 266
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:324 → 533
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:406 → 426
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:348 → 370
    zf-C2H2; Zinc finger, C2H2 type
    pfam02023
    Location:38 → 123
    SCAN; SCAN domain
    pfam13465
    Location:502 → 526
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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