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AGFG1 ArfGAP with FG repeats 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 708910, updated on 17-Aug-2024

Summary

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Official Symbol
AGFG1provided by VGNC
Official Full Name
ArfGAP with FG repeats 1provided by VGNC
Primary source
VGNC:VGNC:69816
See related
Ensembl:ENSMMUG00000013247
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
HRB
Orthologs
human mouse all
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Genomic context

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See AGFG1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
17
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (114919900..115009752)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (109845251..109935129)

Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene mitochondrial fission factor Neighboring gene transmembrane 4 L six family member 20 Neighboring gene ice-structuring protein-like Neighboring gene thiamine transporter 2-like Neighboring gene COP9 signalosome complex subunit 9 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arf-GAP domain and FG repeat-containing protein 1
Names
HIV-1 Rev binding protein
arf-GAP domain and FG repeats-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041765.1 Reference Mmul_10 Primary Assembly

    Range
    114919900..115009752
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028831167.1 → XP_028687000.1  arf-GAP domain and FG repeat-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q2I2, G7N932
    Related
    ENSMMUP00000042244.2, ENSMMUT00000072275.2
    Conserved Domains (3) summary
    COG5347
    Location:8 → 319
    COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
    PRK12727
    Location:434 → 554
    PRK12727; flagellar biosynthesis protein FlhF
    cd08857
    Location:13 → 128
    ArfGap_AGFG1; ArfGAP domain of AGFG1 (ArfGAP domain and FG repeat-containing protein 1)

  2. XM_028831168.1 → XP_028687001.1  arf-GAP domain and FG repeat-containing protein 1 isoform X2

    Conserved Domains (3) summary
    COG5347
    Location:8 → 319
    COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
    PRK12727
    Location:434 → 566
    PRK12727; flagellar biosynthesis protein FlhF
    cd08857
    Location:13 → 128
    ArfGap_AGFG1; ArfGAP domain of AGFG1 (ArfGAP domain and FG repeat-containing protein 1)

  3. XM_028831169.1 → XP_028687002.1  arf-GAP domain and FG repeat-containing protein 1 isoform X3

    Conserved Domains (2) summary
    COG5347
    Location:8 → 319
    COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
    cd08857
    Location:13 → 128
    ArfGap_AGFG1; ArfGAP domain of AGFG1 (ArfGAP domain and FG repeat-containing protein 1)

  4. XM_015111217.2 → XP_014966703.2  arf-GAP domain and FG repeat-containing protein 1 isoform X4

    Conserved Domains (3) summary
    COG5347
    Location:8 → 319
    COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
    PRK12727
    Location:434 → 550
    PRK12727; flagellar biosynthesis protein FlhF
    cd08857
    Location:13 → 128
    ArfGap_AGFG1; ArfGAP domain of AGFG1 (ArfGAP domain and FG repeat-containing protein 1)

  5. XM_028831175.1 → XP_028687008.1  arf-GAP domain and FG repeat-containing protein 1 isoform X10

    UniProtKB/TrEMBL
    H9EP20
    Conserved Domains (3) summary
    COG5347
    Location:8 → 306
    COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
    PRK12727
    Location:410 → 526
    PRK12727; flagellar biosynthesis protein FlhF
    cd08857
    Location:13 → 128
    ArfGap_AGFG1; ArfGAP domain of AGFG1 (ArfGAP domain and FG repeat-containing protein 1)

  6. XM_028831177.1 → XP_028687010.1  arf-GAP domain and FG repeat-containing protein 1 isoform X12

    UniProtKB/TrEMBL
    F6ZJK0, H9EP21
    Related
    ENSMMUP00000017420.4, ENSMMUT00000018599.4
    Conserved Domains (1) summary
    cd08857
    Location:13 → 128
    ArfGap_AGFG1; ArfGAP domain of AGFG1 (ArfGAP domain and FG repeat-containing protein 1)

  7. XM_028831178.1 → XP_028687011.1  arf-GAP domain and FG repeat-containing protein 1 isoform X13

    Conserved Domains (2) summary
    PRK12727
    Location:370 → 486
    PRK12727; flagellar biosynthesis regulator FlhF; Provisional
    cd08857
    Location:13 → 128
    ArfGap_AGFG1; ArfGAP domain of AGFG1 (ArfGAP domain and FG repeat-containing protein 1)

  8. XM_028831171.1 → XP_028687004.1  arf-GAP domain and FG repeat-containing protein 1 isoform X6

    UniProtKB/TrEMBL
    F6SVJ9, G7N932
    Related
    ENSMMUP00000037461.3, ENSMMUT00000044444.3
    Conserved Domains (3) summary
    COG5347
    Location:8 → 306
    COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
    PRK12727
    Location:410 → 530
    PRK12727; flagellar biosynthesis protein FlhF
    cd08857
    Location:13 → 128
    ArfGap_AGFG1; ArfGAP domain of AGFG1 (ArfGAP domain and FG repeat-containing protein 1)

  9. XM_028831174.1 → XP_028687007.1  arf-GAP domain and FG repeat-containing protein 1 isoform X9

    Conserved Domains (2) summary
    PRK12727
    Location:394 → 514
    PRK12727; flagellar biosynthesis protein FlhF
    cd08857
    Location:13 → 128
    ArfGap_AGFG1; ArfGAP domain of AGFG1 (ArfGAP domain and FG repeat-containing protein 1)

  10. XM_028831176.1 → XP_028687009.1  arf-GAP domain and FG repeat-containing protein 1 isoform X11

    Conserved Domains (2) summary
    PRK12727
    Location:370 → 490
    PRK12727; flagellar biosynthesis protein FlhF
    cd08857
    Location:13 → 128
    ArfGap_AGFG1; ArfGAP domain of AGFG1 (ArfGAP domain and FG repeat-containing protein 1)

  11. XM_028831173.1 → XP_028687006.1  arf-GAP domain and FG repeat-containing protein 1 isoform X8

    UniProtKB/TrEMBL
    H9EP22
    Conserved Domains (2) summary
    COG5347
    Location:8 → 306
    COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
    cd08857
    Location:13 → 128
    ArfGap_AGFG1; ArfGAP domain of AGFG1 (ArfGAP domain and FG repeat-containing protein 1)

  12. XM_028831172.1 → XP_028687005.1  arf-GAP domain and FG repeat-containing protein 1 isoform X7

    UniProtKB/TrEMBL
    G7N932
    Conserved Domains (3) summary
    COG5347
    Location:30 → 285
    COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
    PRK12727
    Location:400 → 520
    PRK12727; flagellar biosynthesis regulator FlhF; Provisional
    cl28907
    Location:23 → 94
    ArfGap; GTPase-activating protein (GAP) for the ADP ribosylation factors (ARFs)

  13. XM_028831170.1 → XP_028687003.1  arf-GAP domain and FG repeat-containing protein 1 isoform X5

    UniProtKB/TrEMBL
    G7N932
    Conserved Domains (3) summary
    COG5347
    Location:19 → 301
    COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
    PRK12727
    Location:416 → 536
    PRK12727; flagellar biosynthesis protein FlhF
    cl28907
    Location:32 → 110
    ArfGap; GTPase-activating protein (GAP) for the ADP ribosylation factors (ARFs)
Nucleotide Protein
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