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STRN striatin [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 708491, updated on 17-Aug-2024

Summary

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Official Symbol
STRNprovided by VGNC
Official Full Name
striatinprovided by VGNC
Primary source
VGNC:VGNC:78039
See related
Ensembl:ENSMMUG00000002521
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See STRN in Genome Data Viewer
Location:
chromosome: 13
Exon count:
20
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (71951422..72080825)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (37298700..37430492, complement)

Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114671738 Neighboring gene G-patch domain containing 11 Neighboring gene HEAT repeat containing 5B Neighboring gene 40S ribosomal protein S8 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene vitrin Neighboring gene fasciculation and elongation protein zeta 2 Neighboring gene cysteine rich transmembrane BMP regulator 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables armadillo repeat domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase 2A binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-containing complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
striatin
Names
striatin, calmodulin binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041766.1 Reference Mmul_10 Primary Assembly

    Range
    71951422..72080825
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028831763.1 → XP_028687596.1  striatin isoform X1

    UniProtKB/TrEMBL
    F6YB73, F7C5P0
    Related
    ENSMMUP00000036615.3, ENSMMUT00000043619.3
    Conserved Domains (3) summary
    cd00200
    Location:488 → 812
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:501 → 547
    7WD40; WD40 repeat [structural motif]
    pfam08232
    Location:52 → 177
    Striatin; Striatin family

  2. XM_015112104.2 → XP_014967590.1  striatin isoform X2

    UniProtKB/TrEMBL
    F6YB92, F7C5P0
    Related
    ENSMMUP00000036614.3, ENSMMUT00000043618.3
    Conserved Domains (4) summary
    COG2319
    Location:433 → 777
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:459 → 783
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam08232
    Location:52 → 177
    Striatin; Striatin family
    sd00039
    Location:472 → 518
    7WD40; WD40 repeat [structural motif]

  3. XM_028831764.1 → XP_028687597.1  striatin isoform X3

    UniProtKB/TrEMBL
    H9F8Q7
    Conserved Domains (2) summary
    cd00200
    Location:331 → 655
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:344 → 390
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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