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DESI1 desumoylating isopeptidase 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 708088, updated on 17-Aug-2024

Summary

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Official Symbol
DESI1provided by VGNC
Official Full Name
desumoylating isopeptidase 1provided by VGNC
Primary source
VGNC:VGNC:71702
Locus tag
EGK_03093
See related
Ensembl:ENSMMUG00000050219
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
PPPDE2
Orthologs
human mouse all
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Genomic context

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See DESI1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (9884714..9907262)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (83685197..83707369, complement)

Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene chromosome 10 C22orf46 homolog Neighboring gene U6 spliceosomal RNA Neighboring gene small nuclear ribonucleoprotein 13 Neighboring gene X-ray repair cross complementing 6 Neighboring gene phosphomannomutase 1 Neighboring gene cold shock domain containing C2 Neighboring gene uncharacterized LOC114670348

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein modification by small protein removal IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
desumoylating isopeptidase 1
Names
PPPDE peptidase domain containing 2
PPPDE peptidase domain-containing protein 2
NP_001253874.1
XP_015005887.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001266945.1 → NP_001253874.1  desumoylating isopeptidase 1

    See identical proteins and their annotated locations for NP_001253874.1

    Status: PROVISIONAL

    Source sequence(s)
    JV044554
    UniProtKB/TrEMBL
    A0A5F7ZGE2, A0A8J8YFG0, G7N3Z4
    Related
    ENSMMUP00000063698.1, ENSMMUT00000092185.1
    Conserved Domains (1) summary
    pfam05903
    Location:7 → 149
    Peptidase_C97; PPPDE putative peptidase domain

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041763.1 Reference Mmul_10 Primary Assembly

    Range
    9884714..9907262
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015150401.2 → XP_015005887.1  desumoylating isopeptidase 1 isoform X1

    Conserved Domains (1) summary
    pfam05903
    Location:13 → 125
    Peptidase_C97; PPPDE putative peptidase domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials