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LRRCC1 leucine rich repeat and coiled-coil centrosomal protein 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 707964, updated on 17-Aug-2024

Summary

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Official Symbol
LRRCC1provided by VGNC
Official Full Name
leucine rich repeat and coiled-coil centrosomal protein 1provided by VGNC
Primary source
VGNC:VGNC:84012
Locus tag
EGK_19085
See related
Ensembl:ENSMMUG00000006370
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See LRRCC1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
19
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (85646585..85687854)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (83499612..83541019)

Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene RALY RNA binding protein like Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC106999835 Neighboring gene uncharacterized LOC114680289 Neighboring gene E2F transcription factor 5 Neighboring gene ribosomal biogenesis factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat and coiled-coil domain-containing protein 1
Names
Centrosomal leucine-rich repeat and coiled-coil domain-containing protein
leucine rich repeat and coiled-coil domain containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041761.1 Reference Mmul_10 Primary Assembly

    Range
    85646585..85687854
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028852761.1 → XP_028708594.1  leucine-rich repeat and coiled-coil domain-containing protein 1 isoform X3

    Conserved Domains (1) summary
    COG1196
    Location:345 → 710
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  2. XM_001096398.4 → XP_001096398.3  leucine-rich repeat and coiled-coil domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    F7GYL1, G7MZN7, H9F6P8
    Related
    ENSMMUP00000008410.4, ENSMMUT00000008945.4
    Conserved Domains (6) summary
    COG0419
    Location:421 → 903
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    COG1196
    Location:785 → 1028
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    sd00031
    Location:43 → 64
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:161 → 191
    LRR_RI; leucine-rich repeat [structural motif]
    pfam12799
    Location:43 → 82
    LRR_4; Leucine Rich repeats (2 copies)
    pfam14580
    Location:68 → 200
    LRR_9; Leucine-rich repeat

  3. XM_015145625.2 → XP_015001111.2  leucine-rich repeat and coiled-coil domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    F7GYN2
    Related
    ENSMMUP00000008406.3, ENSMMUT00000008940.3
    Conserved Domains (4) summary
    COG0419
    Location:421 → 903
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    sd00031
    Location:43 → 64
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:161 → 191
    LRR_RI; leucine-rich repeat [structural motif]
    pfam14580
    Location:68 → 200
    LRR_9; Leucine-rich repeat

  4. XM_028852763.1 → XP_028708596.1  leucine-rich repeat and coiled-coil domain-containing protein 1 isoform X5

    Conserved Domains (1) summary
    COG1196
    Location:265 → 630
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  5. XM_028852762.1 → XP_028708595.1  leucine-rich repeat and coiled-coil domain-containing protein 1 isoform X4

    Conserved Domains (1) summary
    COG1196
    Location:271 → 636
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
Nucleotide Protein
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