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PLD4 phospholipase D family member 4 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 707527, updated on 17-Aug-2024

Summary

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Official Symbol
PLD4provided by VGNC
Official Full Name
phospholipase D family member 4provided by VGNC
Primary source
VGNC:VGNC:76100
See related
Ensembl:ENSMMUG00000010578
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PLD4 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (167238610..167246968)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (167296551..167304942)

Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 42 Neighboring gene centrosomal protein 170B Neighboring gene AHNAK nucleoprotein 2 Neighboring gene clathrin binding box of aftiphilin containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hematopoietic progenitor cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipase D4
XP_015000088.1
XP_028706407.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041760.1 Reference Mmul_10 Primary Assembly

    Range
    167238610..167246968
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015144602.2 → XP_015000088.1  phospholipase D4 isoform X2

    UniProtKB/TrEMBL
    F7CNC1, G7MWJ1
    Related
    ENSMMUP00000013866.4, ENSMMUT00000014800.4
    Conserved Domains (3) summary
    cd09148
    Location:313 → 499
    PLDc_vPLD4_2; Putative catalytic domain, repeat 2, of vertebrate phospholipase PLD4
    PHA02820
    Location:101 → 511
    PHA02820; phospholipase-D-like protein; Provisional
    cl15239
    Location:107 → 276
    PLDc_SF; Catalytic domain of phospholipase D superfamily proteins

  2. XM_028850574.1 → XP_028706407.1  phospholipase D4 isoform X1

    UniProtKB/TrEMBL
    G7MWJ1
    Conserved Domains (2) summary
    cd09148
    Location:328 → 514
    PLDc_vPLD4_2; Putative catalytic domain, repeat 2, of vertebrate phospholipase PLD4
    cl15239
    Location:107 → 291
    PLDc_SF; Catalytic domain of phospholipase D superfamily proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials