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SEC24D SEC24 homolog D, COPII coat complex component [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 707521, updated on 17-Aug-2024

Summary

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Official Symbol
SEC24Dprovided by VGNC
Official Full Name
SEC24 homolog D, COPII coat complex componentprovided by VGNC
Primary source
VGNC:VGNC:77154
See related
Ensembl:ENSMMUG00000007294
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SEC24D in Genome Data Viewer
Location:
chromosome: 5
Exon count:
24
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (116773203..116886856, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (117703049..117816084, complement)

Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-like Neighboring gene methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit Neighboring gene synaptopodin 2 Neighboring gene uncharacterized LOC106998476 Neighboring gene myozenin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in COPII-coated vesicle cargo loading IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPII vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum exit site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein transport protein Sec24D
Names
SEC24 family, member D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041758.1 Reference Mmul_10 Primary Assembly

    Range
    116773203..116886856 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028848746.1 → XP_028704579.1  protein transport protein Sec24D isoform X3

    UniProtKB/TrEMBL
    G7MRV1
    Conserved Domains (2) summary
    COG5028
    Location:137 → 1033
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
    pfam09606
    Location:1 → 267
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

  2. XM_028848744.1 → XP_028704577.1  protein transport protein Sec24D isoform X1

    UniProtKB/TrEMBL
    I0FWU4
    Conserved Domains (2) summary
    COG5028
    Location:141 → 1040
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
    pfam09606
    Location:1 → 274
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

  3. XM_028848748.1 → XP_028704581.1  protein transport protein Sec24D isoform X4

    UniProtKB/TrEMBL
    G7MRV1
    Related
    ENSMMUP00000047296.2, ENSMMUT00000071225.2
    Conserved Domains (2) summary
    COG5028
    Location:137 → 1032
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
    pfam09606
    Location:1 → 266
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

  4. XM_028848747.1 → XP_028704580.1  protein transport protein Sec24D isoform X3

    UniProtKB/TrEMBL
    G7MRV1
    Conserved Domains (2) summary
    COG5028
    Location:137 → 1033
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
    pfam09606
    Location:1 → 267
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

  5. XM_015139134.2 → XP_014994620.2  protein transport protein Sec24D isoform X1

    UniProtKB/TrEMBL
    I0FWU4
    Conserved Domains (2) summary
    COG5028
    Location:141 → 1040
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
    pfam09606
    Location:1 → 274
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

  6. XM_002804183.3 → XP_002804229.2  protein transport protein Sec24D isoform X1

    UniProtKB/TrEMBL
    I0FWU4
    Conserved Domains (2) summary
    COG5028
    Location:141 → 1040
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
    pfam09606
    Location:1 → 274
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

  7. XM_028848745.1 → XP_028704578.1  protein transport protein Sec24D isoform X2

    UniProtKB/TrEMBL
    A0A1D5QSX8, I0FWU4
    Related
    ENSMMUP00000051156.2, ENSMMUT00000069390.2
    Conserved Domains (2) summary
    COG5028
    Location:141 → 1039
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
    pfam09606
    Location:1 → 273
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
Nucleotide Protein
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