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RPL12 ribosomal protein L12 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 707504, updated on 5-Mar-2024

Summary

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Gene symbol
RPL12
Gene description
ribosomal protein L12
Locus tag
EGK_07864
See related
Ensembl:ENSMMUG00000000422
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See RPL12 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
6
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (13163272..13167023)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (11475789..11479513)

Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene niban apoptosis regulator 2 Neighboring gene leucine rich repeat and sterile alpha motif containing 1 Neighboring gene small nucleolar RNA SNORA65 Neighboring gene zinc finger protein 79 Neighboring gene solute carrier family 2 member 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the Macaca mulatta transcriptome and the sequence divergence between Macaca and human. Magness CL, et al. Genome Biol, 2005. PMID 15998449, Free PMC Article
  2. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  3. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables large ribosomal subunit rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
large ribosomal subunit protein uL11; 60S ribosomal protein L12

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001193560.1 → NP_001180489.1  large ribosomal subunit protein uL11

    See identical proteins and their annotated locations for NP_001180489.1

    Status: VALIDATED

    Source sequence(s)
    CO647435
    UniProtKB/TrEMBL
    A0A8J8XQZ9, F7AD35, F7D723, G7NEP4
    Related
    ENSMMUP00000000568.1, ENSMMUT00000000617.3
    Conserved Domains (1) summary
    PLN03072
    Location:1 → 165
    PLN03072; 60S ribosomal protein L12; Provisional

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041768.1 Reference Mmul_10 Primary Assembly

    Range
    13163272..13167023
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015116598.2 → XP_014972084.1  60S ribosomal protein L12 isoform X1

    Conserved Domains (1) summary
    PLN03072
    Location:1 → 163
    PLN03072; 60S ribosomal protein L12; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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