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IST1 IST1 factor associated with ESCRT-III [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 707245, updated on 17-Aug-2024

Summary

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Official Symbol
IST1provided by VGNC
Official Full Name
IST1 factor associated with ESCRT-IIIprovided by VGNC
Primary source
VGNC:VGNC:73675
Locus tag
EGK_12962
See related
Ensembl:ENSMMUG00000009688
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
KIAA0174
Orthologs
human mouse all
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Genomic context

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See IST1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
10
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (59589347..59623912, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (56843957..56878515, complement)

Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain-containing protein 25-like Neighboring gene polycystin 1 like 3, transient receptor potential channel interacting Neighboring gene zinc finger protein 821 Neighboring gene ataxin 1 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
IST1 homolog
Names
IST1, ESCRT-III associated factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041773.1 Reference Mmul_10 Primary Assembly

    Range
    59589347..59623912 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015126600.2 → XP_014982086.1  IST1 homolog isoform X1

    UniProtKB/TrEMBL
    A0A5S6RDF2, A0A8J8XAH8, F6RWU3, F6RWV1, F6YAS0, G7NQN8
    Related
    ENSMMUP00000032334.3, ENSMMUT00000039248.3
    Conserved Domains (1) summary
    pfam03398
    Location:13 → 176
    Ist1; Regulator of Vps4 activity in the MVB pathway

  2. XM_015126603.2 → XP_014982089.1  IST1 homolog isoform X4

    Conserved Domains (1) summary
    pfam03398
    Location:13 → 176
    Ist1; Regulator of Vps4 activity in the MVB pathway

  3. XM_015126602.2 → XP_014982088.1  IST1 homolog isoform X3

    Conserved Domains (1) summary
    pfam03398
    Location:13 → 176
    Ist1; Regulator of Vps4 activity in the MVB pathway

  4. XM_015126601.2 → XP_014982087.1  IST1 homolog isoform X2

    Conserved Domains (1) summary
    pfam03398
    Location:13 → 176
    Ist1; Regulator of Vps4 activity in the MVB pathway

  5. XM_028840716.1 → XP_028696549.1  IST1 homolog isoform X5

    Conserved Domains (1) summary
    pfam03398
    Location:1 → 28
    Ist1; Regulator of Vps4 activity in the MVB pathway
Nucleotide Protein
Heading Accession and Version

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