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NECTIN3 nectin cell adhesion molecule 3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 706731, updated on 17-Aug-2024

Summary

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Official Symbol
NECTIN3provided by VGNC
Official Full Name
nectin cell adhesion molecule 3provided by VGNC
Primary source
VGNC:VGNC:83928
See related
Ensembl:ENSMMUG00000009998
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See NECTIN3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (164960742..165088834, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (32162082..32291924)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106996773 Neighboring gene CD96 molecule Neighboring gene zinc finger BED-type containing 2 Neighboring gene uncharacterized LOC100429817 Neighboring gene uncharacterized LOC114676433

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in symbiont entry into host cell IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in apical junction complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nectin-3
Names
poliovirus receptor-related protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    164960742..165088834 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001102320.4 → XP_001102320.1  nectin-3 isoform X2

    See identical proteins and their annotated locations for XP_001102320.1

    UniProtKB/TrEMBL
    F6QU38
    Related
    ENSMMUP00000013077.4, ENSMMUT00000013962.4
    Conserved Domains (4) summary
    cd05887
    Location:72 → 167
    Ig1_Nectin-3_like; First immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3) and similar proteins
    smart00410
    Location:64 → 166
    IG_like; Immunoglobulin like
    pfam13927
    Location:287 → 342
    Ig_3; Immunoglobulin domain
    cl11960
    Location:170 → 265
    Ig; Immunoglobulin domain

  2. XM_015129839.2 → XP_014985325.1  nectin-3 isoform X4

    UniProtKB/TrEMBL
    F6QU38
    Conserved Domains (3) summary
    cd05887
    Location:53 → 148
    Ig1_Nectin-3_like; First immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3) and similar proteins
    smart00410
    Location:268 → 329
    IG_like; Immunoglobulin like
    cl11960
    Location:151 → 246
    Ig; Immunoglobulin domain

  3. XM_015129838.2 → XP_014985324.2  nectin-3 isoform X3

    Conserved Domains (3) summary
    cd05887
    Location:72 → 167
    Ig1_Nectin-3_like; First immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3) and similar proteins
    smart00409
    Location:287 → 348
    IG; Immunoglobulin
    cl11960
    Location:170 → 265
    Ig; Immunoglobulin domain

  4. XM_015129837.2 → XP_014985323.1  nectin-3 isoform X1

    UniProtKB/TrEMBL
    A0A1D5QFJ5, H9F8Y1
    Related
    ENSMMUP00000046815.2, ENSMMUT00000065267.2
    Conserved Domains (3) summary
    cd05887
    Location:72 → 167
    Ig1_Nectin-3_like; First immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3) and similar proteins
    smart00410
    Location:287 → 348
    IG_like; Immunoglobulin like
    cl11960
    Location:170 → 265
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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