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GPBP1L1 GC-rich promoter binding protein 1 like 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 706690, updated on 17-Aug-2024

Summary

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Official Symbol
GPBP1L1provided by VGNC
Official Full Name
GC-rich promoter binding protein 1 like 1provided by VGNC
Primary source
VGNC:VGNC:73023
Locus tag
EGK_00704
See related
Ensembl:ENSMMUG00000001960
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See GPBP1L1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (178730445..178792302)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (45211528..45272969, complement)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene intracisternal A particle-promoted polypeptide Neighboring gene transmembrane protein 69 Neighboring gene coiled-coil domain containing 17 Neighboring gene nuclear autoantigenic sperm protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vasculin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001261345.1 → NP_001248274.1  vasculin-like protein 1

    See identical proteins and their annotated locations for NP_001248274.1

    Status: PROVISIONAL

    Source sequence(s)
    JV043934
    UniProtKB/TrEMBL
    A0A8J8XN46, F6VH41, G7MGQ2
    Conserved Domains (1) summary
    pfam15337
    Location:381 → 471
    Vasculin; Vascular protein family Vasculin-like 1

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    178730445..178792302
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015138385.2 → XP_014993871.1  vasculin-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8J8XN46, F6VH41, G7MGQ2
    Related
    ENSMMUP00000065921.1, ENSMMUT00000079518.1
    Conserved Domains (1) summary
    pfam15337
    Location:381 → 471
    Vasculin; Vascular protein family Vasculin-like 1

  2. XM_015138379.2 → XP_014993865.1  vasculin-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8J8XN46, F6VH41, G7MGQ2
    Related
    ENSMMUP00000002618.2, ENSMMUT00000002774.4
    Conserved Domains (1) summary
    pfam15337
    Location:381 → 471
    Vasculin; Vascular protein family Vasculin-like 1

  3. XM_015138369.2 → XP_014993855.1  vasculin-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8J8XN46, F6VH41, G7MGQ2
    Related
    ENSMMUP00000078045.1, ENSMMUT00000096234.1
    Conserved Domains (1) summary
    pfam15337
    Location:381 → 471
    Vasculin; Vascular protein family Vasculin-like 1

  4. XM_015138389.2 → XP_014993875.1  vasculin-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8J8XN46, F6VH41, G7MGQ2
    Conserved Domains (1) summary
    pfam15337
    Location:381 → 471
    Vasculin; Vascular protein family Vasculin-like 1
Nucleotide Protein
Heading Accession and Version

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