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PDLIM7 PDZ and LIM domain 7 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 706581, updated on 17-Aug-2024

Summary

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Official Symbol
PDLIM7provided by VGNC
Official Full Name
PDZ and LIM domain 7provided by VGNC
Primary source
VGNC:VGNC:75848
See related
Ensembl:ENSMMUG00000003146
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PDLIM7 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (174977682..174991776, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (176140654..176154159, complement)

Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor kinase 6 Neighboring gene proline rich 7, synaptic Neighboring gene drebrin 1 Neighboring gene uncharacterized LOC114678984 Neighboring gene docking protein 3 Neighboring gene DEAD-box helicase 41

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables muscle alpha-actinin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in muscle structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of filamentous actin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in stress fiber IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PDZ and LIM domain protein 7
Names
PDZ and LIM domain 7 (enigma)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041759.1 Reference Mmul_10 Primary Assembly

    Range
    174977682..174991776 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015141524.2 → XP_014997010.1  PDZ and LIM domain protein 7 isoform X4

    UniProtKB/TrEMBL
    G7MUG3
    Conserved Domains (6) summary
    cd09452
    Location:248 → 299
    LIM1_Enigma; The first LIM domain of Enigma
    cd09456
    Location:307 → 358
    LIM2_Enigma; The second LIM domain of Enigma
    cd09458
    Location:366 → 420
    LIM3_Enigma; The third LIM domain of Enigma
    PHA03247
    Location:83 → 221
    PHA03247; large tegument protein UL36; Provisional
    cd00992
    Location:5 → 79
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam15936
    Location:103 → 154
    DUF4749; Domain of unknown function (DUF4749)

  2. XM_028849958.1 → XP_028705791.1  PDZ and LIM domain protein 7 isoform X2

    UniProtKB/TrEMBL
    F7EPE5, G7MUG3, I0FWE5
    Related
    ENSMMUP00000004210.4, ENSMMUT00000004461.4
    Conserved Domains (6) summary
    cd09452
    Location:282 → 333
    LIM1_Enigma; The first LIM domain of Enigma
    cd09456
    Location:341 → 392
    LIM2_Enigma; The second LIM domain of Enigma
    cd09458
    Location:400 → 454
    LIM3_Enigma; The third LIM domain of Enigma
    PHA03247
    Location:81 → 247
    PHA03247; large tegument protein UL36; Provisional
    cd00992
    Location:5 → 79
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam15936
    Location:130 → 188
    DUF4749; Domain of unknown function (DUF4749)

  3. XM_028849957.1 → XP_028705790.1  PDZ and LIM domain protein 7 isoform X1

    UniProtKB/TrEMBL
    G7MUG3
    Conserved Domains (6) summary
    cd09452
    Location:289 → 340
    LIM1_Enigma; The first LIM domain of Enigma
    cd09456
    Location:348 → 399
    LIM2_Enigma; The second LIM domain of Enigma
    cd09458
    Location:407 → 461
    LIM3_Enigma; The third LIM domain of Enigma
    PHA03247
    Location:97 → 262
    PHA03247; large tegument protein UL36; Provisional
    cd00992
    Location:5 → 79
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam15936
    Location:136 → 195
    DUF4749; Domain of unknown function (DUF4749)

  4. XM_028849959.1 → XP_028705792.1  PDZ and LIM domain protein 7 isoform X3

    UniProtKB/TrEMBL
    G7MUG3
    Conserved Domains (5) summary
    PHA03377
    Location:35 → 201
    PHA03377; EBNA-3C; Provisional
    cd09452
    Location:258 → 309
    LIM1_Enigma; The first LIM domain of Enigma
    cd09456
    Location:317 → 368
    LIM2_Enigma; The second LIM domain of Enigma
    cd09458
    Location:376 → 430
    LIM3_Enigma; The third LIM domain of Enigma
    cd00992
    Location:5 → 79
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

  5. XM_015141526.2 → XP_014997012.1  PDZ and LIM domain protein 7 isoform X5

    Conserved Domains (4) summary
    cd09456
    Location:255 → 306
    LIM2_Enigma; The second LIM domain of Enigma
    cd09458
    Location:314 → 368
    LIM3_Enigma; The third LIM domain of Enigma
    pfam15936
    Location:51 → 95
    DUF4749; Domain of unknown function (DUF4749)
    cl02475
    Location:196 → 247
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

  6. XM_028849960.1 → XP_028705793.1  PDZ and LIM domain protein 7 isoform X6

    UniProtKB/TrEMBL
    F7EPD7, I0FWE6
    Related
    ENSMMUP00000004211.4, ENSMMUT00000004462.4
    Conserved Domains (2) summary
    cd00992
    Location:5 → 79
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam15936
    Location:130 → 188
    DUF4749; Domain of unknown function (DUF4749)
Nucleotide Protein
Heading Accession and Version

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