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SSR3 signal sequence receptor subunit 3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 706518, updated on 17-Aug-2024

Summary

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Official Symbol
SSR3provided by VGNC
Official Full Name
signal sequence receptor subunit 3provided by VGNC
Primary source
VGNC:VGNC:82769
Locus tag
EGK_11971
See related
Ensembl:ENSMMUG00000016970
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SSR3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (58842944..58856705, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (143621805..143635566, complement)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene MRE11 meiotic recombination 11 homolog A (S. cerevisiae)-like Neighboring gene potassium voltage-gated channel subfamily A regulatory beta subunit 1 Neighboring gene U5 small nuclear ribonucleoprotein 40 kDa protein pseudogene Neighboring gene TCDD inducible poly(ADP-ribose) polymerase Neighboring gene uncharacterized LOC106997061

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in SRP-dependent cotranslational protein targeting to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
translocon-associated protein subunit gamma

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001266544.1 → NP_001253473.1  translocon-associated protein subunit gamma

    See identical proteins and their annotated locations for NP_001253473.1

    Status: PROVISIONAL

    Source sequence(s)
    JV044116
    UniProtKB/TrEMBL
    F7B6K2, H9YW96
    Related
    ENSMMUP00000061776.1, ENSMMUT00000101851.1
    Conserved Domains (1) summary
    pfam07074
    Location:12 → 183
    TRAP-gamma; Translocon-associated protein, gamma subunit (TRAP-gamma)

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    58842944..58856705 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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