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Fam241a family with sequence similarity 241, member A [ Mus musculus (house mouse) ]

Gene ID: 70617, updated on 27-Nov-2024

Summary

Official Symbol
Fam241aprovided by MGI
Official Full Name
family with sequence similarity 241, member Aprovided by MGI
Primary source
MGI:MGI:1917867
See related
Ensembl:ENSMUSG00000050549 AllianceGenome:MGI:1917867
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2700063A17Rik; 5730508B09Rik
Summary
Predicted to be located in Golgi apparatus. Predicted to be active in intracellular membrane-bounded organelle. Is expressed in gut dorsal mesentery. Orthologous to human FAM241A (family with sequence similarity 241 member A). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Broad expression in liver E14 (RPKM 18.4), liver E14.5 (RPKM 17.5) and 24 other tissues See more
Orthologs
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Genomic context

See Fam241a in Genome Data Viewer
Location:
3 G2; 3 56.54 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (127663337..127689972, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (127869688..127896323, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene adaptor-related protein complex 1 associated regulatory protein Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:127540571-127540758 Neighboring gene predicted gene 43653 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:127571005-127571206 Neighboring gene predicted gene, 35585 Neighboring gene STARR-positive B cell enhancer ABC_E11217 Neighboring gene RIKEN cDNA 9830132P13 gene Neighboring gene STARR-seq mESC enhancer starr_08958 Neighboring gene STARR-positive B cell enhancer ABC_E9572 Neighboring gene predicted gene, 35667

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 

General gene information

Markers

Clone Names

  • MGC151168, MGC151170

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
located_in Golgi apparatus ISO
Inferred from Sequence Orthology
more info
 
is_active_in intracellular membrane-bounded organelle IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
uncharacterized protein FAM241A
Names
uncharacterized protein C4orf32 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027482.3NP_081758.1  uncharacterized protein FAM241A

    See identical proteins and their annotated locations for NP_081758.1

    Status: VALIDATED

    Source sequence(s)
    AC163391
    Consensus CDS
    CCDS17829.1
    UniProtKB/Swiss-Prot
    Q9CZL2
    UniProtKB/TrEMBL
    I3PQX0
    Related
    ENSMUSP00000142535.2, ENSMUST00000199273.2
    Conserved Domains (1) summary
    pfam15378
    Location:73128
    DUF4605; Domain of unknown function (DUF4605)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    127663337..127689972 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)