PABPC1 poly(A) binding protein cytoplasmic 1 [Macaca mulatta (Rhesus monkey)] - Gene

Summary

Official Symbol: PABPC1provided by VGNC
Official Full Name: poly(A) binding protein cytoplasmic 1provided by VGNC
Primary source: VGNC:VGNC:84098
See related: Ensembl:ENSMMUG00000017786
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Macaca mulatta
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 8

Exon count:: 15

Annotation release	Status	Assembly	Chr	Location
103	current	Mmul_10 (GCF_003339765.1)	8	NC_041761.1 (100974437..100992507, complement)
102	previous assembly	Mmul_8.0.1 (GCF_000772875.2)	8	NC_027900.1 (99416995..99435051, complement)

Chromosome 8 - NC_041761.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Markers

GDB:568589 (e-PCR)
- UniSTS:157726

Pabpc1 (e-PCR), detects polymorphism
- UniSTS:265534

SHGC-30876 (e-PCR)
- UniSTS:64326

D13S1095E (e-PCR)
- UniSTS:153224

RH68348 (e-PCR)
- UniSTS:79005

G49185 (e-PCR)
- UniSTS:108964

Pabpc1 (e-PCR), detects polymorphism
- UniSTS:479185

UniSTS:479186 (e-PCR)
- UniSTS:479186

Pabpc2 (e-PCR), detects polymorphism
- UniSTS:479186

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables mRNA 3'-UTR binding	IEA Inferred from Electronic Annotation more info	PubMed
enables poly(A) binding	IEA Inferred from Electronic Annotation more info	PubMed
enables poly(U) RNA binding	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytosol	IEA Inferred from Electronic Annotation more info	PubMed
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed
part_of ribonucleoprotein complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: polyadenylate-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001257897.1 → NP_001244826.1 polyadenylate-binding protein 1

See identical proteins and their annotated locations for NP_001244826.1

Status: PROVISIONAL

Source sequence(s)

JU333981

UniProtKB/TrEMBL

I0FGP0

Related

ENSMMUP00000015180.4, ENSMMUT00000016198.4

Conserved Domains (1) summary

TIGR01628
Location:11 → 615

PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

NC_041761.1 Reference Mmul_10 Primary Assembly

Range

100974437..100992507 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_028852244.1 → XP_028708077.1 polyadenylate-binding protein 1 isoform X1

UniProtKB/TrEMBL

F7BM39

Conserved Domains (1) summary

TIGR01628
Location:11 → 617

PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family