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AMIGO3 adhesion molecule with Ig like domain 3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 705693, updated on 17-Aug-2024

Summary

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Official Symbol
AMIGO3provided by VGNC
Official Full Name
adhesion molecule with Ig like domain 3provided by VGNC
Primary source
VGNC:VGNC:69681
See related
Ensembl:ENSMMUG00000014582
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See AMIGO3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (105832773..105835731, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (92615703..92619354)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene acylaminoacyl-peptide hydrolase Neighboring gene macrophage stimulating 1 Neighboring gene ring finger protein 123 Neighboring gene GDP-mannose pyrophosphorylase B Neighboring gene inositol hexakisphosphate kinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
amphoterin-induced protein 3
XP_001107400.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    105832773..105835731 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001107400.4 → XP_001107400.1  amphoterin-induced protein 3

    See identical proteins and their annotated locations for XP_001107400.1

    UniProtKB/TrEMBL
    F7GRK0
    Related
    ENSMMUP00000019146.2, ENSMMUT00000020455.4
    Conserved Domains (5) summary
    smart00410
    Location:286 → 371
    IG_like; Immunoglobulin like
    cd00116
    Location:45 → 221
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:45 → 65
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:86 → 145
    LRR_8; Leucine rich repeat
    cl11960
    Location:292 → 355
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials