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LCOR ligand dependent nuclear receptor corepressor [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 705646, updated on 17-Aug-2024

Summary

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Official Symbol
LCORprovided by VGNC
Official Full Name
ligand dependent nuclear receptor corepressorprovided by VGNC
Primary source
VGNC:VGNC:106067
Locus tag
EGK_19939
See related
Ensembl:ENSMMUG00000010427
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See LCOR in Genome Data Viewer
Location:
chromosome: 9
Exon count:
11
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (97274514..97437978)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (92323094..92480826)

Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene growth/differentiation factor 11-like Neighboring gene microRNA mir-607 Neighboring gene slit guidance ligand 1 Neighboring gene Rho GTPase activating protein 19

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein C10orf12; ligand-dependent corepressor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041762.1 Reference Mmul_10 Primary Assembly

    Range
    97274514..97437978
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015147851.2 → XP_015003337.2  ligand-dependent corepressor isoform X3

    UniProtKB/TrEMBL
    A0A5F7ZKB4, A0A5F7ZL44
    Related
    ENSMMUP00000066072.1, ENSMMUT00000097802.1
    Conserved Domains (3) summary
    PHA03307
    Location:717 → 878
    PHA03307; transcriptional regulator ICP4; Provisional
    COG5271
    Location:842 → 1148
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam15090
    Location:1236 → 1696
    DUF4553; Domain of unknown function (DUF4553)

  2. XM_028826721.1 → XP_028682554.1  ligand-dependent corepressor isoform X7

    Conserved Domains (1) summary
    pfam05225
    Location:494 → 537
    HTH_psq; helix-turn-helix, Psq domain

  3. XM_015147845.2 → XP_015003331.1  ligand-dependent corepressor isoform X5

    UniProtKB/TrEMBL
    F7EFY1, G7N2N6
    Related
    ENSMMUP00000076655.1, ENSMMUT00000080358.1
    Conserved Domains (3) summary
    PHA03307
    Location:575 → 736
    PHA03307; transcriptional regulator ICP4; Provisional
    COG5271
    Location:700 → 1006
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam15090
    Location:1094 → 1554
    DUF4553; Domain of unknown function (DUF4553)

  4. XM_015147855.2 → XP_015003341.1  ligand-dependent corepressor isoform X6

    UniProtKB/TrEMBL
    A0A5F7ZWL8, A0A8J8YBR6, F7CXL8, G7N2N5
    Related
    ENSMMUP00000070051.1, ENSMMUT00000106767.1
    Conserved Domains (1) summary
    pfam05225
    Location:352 → 395
    HTH_psq; helix-turn-helix, Psq domain

  5. XM_015147846.2 → XP_015003332.1  ligand-dependent corepressor isoform X5

    UniProtKB/TrEMBL
    F7EFY1, G7N2N6
    Conserved Domains (3) summary
    PHA03307
    Location:575 → 736
    PHA03307; transcriptional regulator ICP4; Provisional
    COG5271
    Location:700 → 1006
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam15090
    Location:1094 → 1554
    DUF4553; Domain of unknown function (DUF4553)

  6. XM_015147844.2 → XP_015003330.1  ligand-dependent corepressor isoform X4

    UniProtKB/TrEMBL
    A0A5F7ZL44
    Conserved Domains (3) summary
    PHA03307
    Location:700 → 861
    PHA03307; transcriptional regulator ICP4; Provisional
    COG5271
    Location:825 → 1131
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam15090
    Location:1219 → 1679
    DUF4553; Domain of unknown function (DUF4553)

  7. XM_028826717.1 → XP_028682550.1  ligand-dependent corepressor isoform X4

    UniProtKB/TrEMBL
    A0A5F7ZL44
    Conserved Domains (3) summary
    PHA03307
    Location:700 → 861
    PHA03307; transcriptional regulator ICP4; Provisional
    COG5271
    Location:825 → 1131
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam15090
    Location:1219 → 1679
    DUF4553; Domain of unknown function (DUF4553)

  8. XM_028826719.1 → XP_028682552.1  ligand-dependent corepressor isoform X5

    UniProtKB/TrEMBL
    F7EFY1, G7N2N6
    Conserved Domains (3) summary
    PHA03307
    Location:575 → 736
    PHA03307; transcriptional regulator ICP4; Provisional
    COG5271
    Location:700 → 1006
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam15090
    Location:1094 → 1554
    DUF4553; Domain of unknown function (DUF4553)

  9. XM_028826722.1 → XP_028682555.1  ligand-dependent corepressor isoform X6

    UniProtKB/TrEMBL
    A0A5F7ZWL8, A0A8J8YBR6, F7CXL8, G7N2N5
    Related
    ENSMMUP00000013669.3, ENSMMUT00000014589.4
    Conserved Domains (1) summary
    pfam05225
    Location:352 → 395
    HTH_psq; helix-turn-helix, Psq domain

  10. XM_028826718.1 → XP_028682551.1  ligand-dependent corepressor isoform X4

    UniProtKB/TrEMBL
    A0A5F7ZL44
    Conserved Domains (3) summary
    PHA03307
    Location:700 → 861
    PHA03307; transcriptional regulator ICP4; Provisional
    COG5271
    Location:825 → 1131
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam15090
    Location:1219 → 1679
    DUF4553; Domain of unknown function (DUF4553)

  11. XM_028826715.1 → XP_028682548.1  ligand-dependent corepressor isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZL44
    Conserved Domains (2) summary
    COG5271
    Location:887 → 1193
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam15090
    Location:1281 → 1741
    DUF4553; Domain of unknown function (DUF4553)

  12. XM_028826720.1 → XP_028682553.1  ligand-dependent corepressor isoform X6

    UniProtKB/TrEMBL
    A0A5F7ZWL8, A0A8J8YBR6, F7CXL8, G7N2N5
    Conserved Domains (1) summary
    pfam05225
    Location:352 → 395
    HTH_psq; helix-turn-helix, Psq domain

  13. XM_028826716.1 → XP_028682549.1  ligand-dependent corepressor isoform X2

    UniProtKB/TrEMBL
    A0A5F7ZL44
    Conserved Domains (3) summary
    PHA03307
    Location:760 → 921
    PHA03307; transcriptional regulator ICP4; Provisional
    COG5271
    Location:885 → 1191
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam15090
    Location:1279 → 1739
    DUF4553; Domain of unknown function (DUF4553)

  14. XM_015147852.2 → XP_015003338.1  ligand-dependent corepressor isoform X5

    UniProtKB/TrEMBL
    F7EFY1, G7N2N6
    Related
    ENSMMUP00000035753.3, ENSMMUT00000014590.4
    Conserved Domains (3) summary
    PHA03307
    Location:575 → 736
    PHA03307; transcriptional regulator ICP4; Provisional
    COG5271
    Location:700 → 1006
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam15090
    Location:1094 → 1554
    DUF4553; Domain of unknown function (DUF4553)
Nucleotide Protein
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