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PAX3 paired box 3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 705315, updated on 17-Aug-2024

Summary

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Official Symbol
PAX3provided by VGNC
Official Full Name
paired box 3provided by VGNC
Primary source
VGNC:VGNC:75762
See related
Ensembl:ENSMMUG00000020409
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PAX3 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
9
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (109647443..109747957, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (104446926..104549022, complement)

Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene stress-70 protein, mitochondrial pseudogene Neighboring gene 60S ribosomal protein L23a pseudogene Neighboring gene serine/arginine repetitive matrix protein 2-like Neighboring gene CCDC140 long non-coding RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
paired box protein Pax-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041765.1 Reference Mmul_10 Primary Assembly

    Range
    109647443..109747957 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001107687.4 → XP_001107687.2  paired box protein Pax-3 isoform X1

    See identical proteins and their annotated locations for XP_001107687.2

    UniProtKB/TrEMBL
    A0A1D5QPL6, G7N913
    Related
    ENSMMUP00000049993.2, ENSMMUT00000066776.2
    Conserved Domains (3) summary
    smart00351
    Location:34 → 159
    PAX; Paired Box domain
    pfam00046
    Location:222 → 276
    Homeobox; Homeobox domain
    pfam12360
    Location:347 → 391
    Pax7; Paired box protein 7

  2. XM_028831147.1 → XP_028686980.1  paired box protein Pax-3 isoform X2

    UniProtKB/TrEMBL
    G7N913
    Conserved Domains (3) summary
    smart00351
    Location:34 → 158
    PAX; Paired Box domain
    pfam00046
    Location:221 → 275
    Homeobox; Homeobox domain
    pfam12360
    Location:346 → 390
    Pax7; Paired box protein 7
Nucleotide Protein
Heading Accession and Version

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Research Materials