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PUM1 pumilio RNA binding family member 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 704848, updated on 17-Aug-2024

Summary

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Official Symbol
PUM1provided by VGNC
Official Full Name
pumilio RNA binding family member 1provided by VGNC
Primary source
VGNC:VGNC:76479
Locus tag
EGK_00481
See related
Ensembl:ENSMMUG00000013520
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PUM1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
23
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (193593795..193731446)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (29990739..30129663, complement)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L21 pseudogene Neighboring gene selenoprotein W pseudogene Neighboring gene small nucleolar RNA SNORD103/SNORD85 Neighboring gene small nucleolar RNA SNORD103/SNORD85 Neighboring gene small nucleolar RNA SNORD103/SNORD85 Neighboring gene uncharacterized LOC114673215 Neighboring gene syndecan 3 Neighboring gene uncharacterized LOC106997430

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in miRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mRNA stability IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pumilio homolog 1
Names
pumilio 1-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    193593795..193731446
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028836843.1 → XP_028692676.1  pumilio homolog 1 isoform X1

    UniProtKB/TrEMBL
    F7GNR6
    Conserved Domains (1) summary
    cd07920
    Location:884 → 1207
    Pumilio; Pumilio-family RNA binding domain

  2. XM_028836848.1 → XP_028692681.1  pumilio homolog 1 isoform X3

    UniProtKB/TrEMBL
    F7GNR6
    Conserved Domains (1) summary
    cd07920
    Location:884 → 1205
    Pumilio; Pumilio-family RNA binding domain

  3. XM_028836906.1 → XP_028692739.1  pumilio homolog 1 isoform X16

    UniProtKB/TrEMBL
    F7GNR6
    Conserved Domains (1) summary
    cd07920
    Location:805 → 1128
    Pumilio; Pumilio-family RNA binding domain

  4. XM_028836911.1 → XP_028692744.1  pumilio homolog 1 isoform X17

    UniProtKB/TrEMBL
    F7GNR6
    Conserved Domains (1) summary
    cd07920
    Location:805 → 1126
    Pumilio; Pumilio-family RNA binding domain

  5. XM_028836868.1 → XP_028692701.1  pumilio homolog 1 isoform X7

    UniProtKB/TrEMBL
    F7GNR6
    Conserved Domains (1) summary
    cd07920
    Location:857 → 1180
    Pumilio; Pumilio-family RNA binding domain

  6. XM_028836934.1 → XP_028692767.1  pumilio homolog 1 isoform X22

    UniProtKB/TrEMBL
    F7GNR6
    Conserved Domains (1) summary
    cd07920
    Location:778 → 1101
    Pumilio; Pumilio-family RNA binding domain

  7. XM_028836851.1 → XP_028692684.1  pumilio homolog 1 isoform X4

    UniProtKB/TrEMBL
    F7GNR6
    Conserved Domains (1) summary
    cd07920
    Location:880 → 1203
    Pumilio; Pumilio-family RNA binding domain

  8. XM_028836878.1 → XP_028692711.1  pumilio homolog 1 isoform X9

    UniProtKB/TrEMBL
    F7GNR6
    Conserved Domains (1) summary
    cd07920
    Location:853 → 1174
    Pumilio; Pumilio-family RNA binding domain

  9. XM_028836866.1 → XP_028692699.1  pumilio homolog 1 isoform X6

    UniProtKB/TrEMBL
    F7GNR6
    Conserved Domains (1) summary
    cd07920
    Location:879 → 1200
    Pumilio; Pumilio-family RNA binding domain

  10. XM_028836874.1 → XP_028692707.1  pumilio homolog 1 isoform X8

    UniProtKB/TrEMBL
    F7GNR6
    Conserved Domains (1) summary
    cd07920
    Location:852 → 1175
    Pumilio; Pumilio-family RNA binding domain

  11. XM_028836845.1 → XP_028692678.1  pumilio homolog 1 isoform X2

    UniProtKB/TrEMBL
    F7GNR6
    Conserved Domains (1) summary
    cd07920
    Location:883 → 1206
    Pumilio; Pumilio-family RNA binding domain

  12. XM_028836922.1 → XP_028692755.1  pumilio homolog 1 isoform X18

    UniProtKB/TrEMBL
    F7GNR4
    Conserved Domains (1) summary
    cd07920
    Location:788 → 1111
    Pumilio; Pumilio-family RNA binding domain

  13. XM_028836932.1 → XP_028692765.1  pumilio homolog 1 isoform X21

    UniProtKB/TrEMBL
    F7GNR4
    Conserved Domains (1) summary
    cd07920
    Location:784 → 1105
    Pumilio; Pumilio-family RNA binding domain

  14. XM_028836928.1 → XP_028692761.1  pumilio homolog 1 isoform X20

    UniProtKB/TrEMBL
    A0A1D5R313, F7GNR4
    Related
    ENSMMUP00000054698.2, ENSMMUT00000054156.2
    Conserved Domains (1) summary
    cd07920
    Location:783 → 1106
    Pumilio; Pumilio-family RNA binding domain

  15. XM_028836942.1 → XP_028692775.1  pumilio homolog 1 isoform X26

    UniProtKB/TrEMBL
    F7GNR4
    Conserved Domains (1) summary
    cd07920
    Location:642 → 965
    Pumilio; Pumilio-family RNA binding domain

  16. XM_028836944.1 → XP_028692777.1  pumilio homolog 1 isoform X27

    UniProtKB/TrEMBL
    F7GNR4
    Conserved Domains (1) summary
    cd07920
    Location:638 → 961
    Pumilio; Pumilio-family RNA binding domain

  17. XM_028836954.1 → XP_028692787.1  pumilio homolog 1 isoform X28

    UniProtKB/TrEMBL
    F7GNR4
    Conserved Domains (1) summary
    cd07920
    Location:637 → 960
    Pumilio; Pumilio-family RNA binding domain

  18. XM_028836964.1 → XP_028692797.1  pumilio homolog 1 isoform X29

    UniProtKB/TrEMBL
    F7GNR4
    Conserved Domains (1) summary
    cd07920
    Location:637 → 958
    Pumilio; Pumilio-family RNA binding domain

  19. XM_028836861.1 → XP_028692694.1  pumilio homolog 1 isoform X5

    UniProtKB/TrEMBL
    F7GNR6, G7MI17
    Conserved Domains (1) summary
    cd07920
    Location:879 → 1202
    Pumilio; Pumilio-family RNA binding domain

  20. XM_015133602.2 → XP_014989088.1  pumilio homolog 1 isoform X10

    UniProtKB/TrEMBL
    F7GNR6
    Conserved Domains (1) summary
    cd07920
    Location:848 → 1171
    Pumilio; Pumilio-family RNA binding domain

  21. XM_015133640.2 → XP_014989126.1  pumilio homolog 1 isoform X12

    UniProtKB/TrEMBL
    F7GNR6, H9YY47
    Related
    ENSMMUP00000078498.1, ENSMMUT00000080570.1
    Conserved Domains (1) summary
    cd07920
    Location:843 → 1166
    Pumilio; Pumilio-family RNA binding domain

  22. XM_015133646.2 → XP_014989132.1  pumilio homolog 1 isoform X13

    UniProtKB/TrEMBL
    F7GNR6, H9EP65
    Related
    ENSMMUP00000017782.4, ENSMMUT00000018986.4
    Conserved Domains (1) summary
    cd07920
    Location:843 → 1164
    Pumilio; Pumilio-family RNA binding domain

  23. XM_015133611.2 → XP_014989097.1  pumilio homolog 1 isoform X11

    UniProtKB/TrEMBL
    F7GNR6
    Conserved Domains (1) summary
    cd07920
    Location:847 → 1170
    Pumilio; Pumilio-family RNA binding domain

  24. XM_015133676.2 → XP_014989162.1  pumilio homolog 1 isoform X23

    UniProtKB/TrEMBL
    F7GNR4
    Related
    ENSMMUP00000040466.3, ENSMMUT00000047432.3
    Conserved Domains (1) summary
    cd07920
    Location:752 → 1075
    Pumilio; Pumilio-family RNA binding domain

  25. XM_028836940.1 → XP_028692773.1  pumilio homolog 1 isoform X25

    UniProtKB/TrEMBL
    F7GNR6
    Conserved Domains (1) summary
    cd07920
    Location:724 → 1047
    Pumilio; Pumilio-family RNA binding domain

  26. XM_028836937.1 → XP_028692770.1  pumilio homolog 1 isoform X24

    UniProtKB/TrEMBL
    F7GNR6
    Related
    ENSMMUP00000061717.1, ENSMMUT00000098574.1
    Conserved Domains (1) summary
    cd07920
    Location:765 → 1088
    Pumilio; Pumilio-family RNA binding domain

  27. XM_015133619.2 → XP_014989105.1  pumilio homolog 1 isoform X14

    UniProtKB/TrEMBL
    F7GNR6
    Conserved Domains (1) summary
    cd07920
    Location:848 → 1169
    Pumilio; Pumilio-family RNA binding domain

  28. XM_028836902.1 → XP_028692735.1  pumilio homolog 1 isoform X15

    UniProtKB/TrEMBL
    F7GNR6
    Related
    ENSMMUP00000078029.1, ENSMMUT00000087873.1
    Conserved Domains (1) summary
    cd07920
    Location:844 → 1165
    Pumilio; Pumilio-family RNA binding domain

  29. XM_001096958.4 → XP_001096958.1  pumilio homolog 1 isoform X19

    See identical proteins and their annotated locations for XP_001096958.1

    UniProtKB/TrEMBL
    F7GNR6
    Conserved Domains (1) summary
    cd07920
    Location:817 → 1140
    Pumilio; Pumilio-family RNA binding domain
Nucleotide Protein
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