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TMC1 transmembrane channel like 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 704827, updated on 17-Aug-2024

Summary

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Official Symbol
TMC1provided by VGNC
Official Full Name
transmembrane channel like 1provided by VGNC
Primary source
VGNC:VGNC:79037
See related
Ensembl:ENSMMUG00000012503
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See TMC1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
21
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (88072429..88242721)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (88871104..89041736)

Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene 40S ribosomal protein S20 pseudogene Neighboring gene ubiquitin-40S ribosomal protein S27a pseudogene Neighboring gene aldehyde dehydrogenase 1 family member A1 Neighboring gene uncharacterized LOC114672818 Neighboring gene cytochrome P450 family 1 subfamily D member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mechanosensitive monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in detection of mechanical stimulus involved in sensory perception of sound IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vestibular reflex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane channel-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041768.1 Reference Mmul_10 Primary Assembly

    Range
    88072429..88242721
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015117946.2 → XP_014973432.1  transmembrane channel-like protein 1

    UniProtKB/TrEMBL
    F7EGW9
    Related
    ENSMMUP00000016426.4, ENSMMUT00000017541.4
    Conserved Domains (1) summary
    pfam07810
    Location:565 → 680
    TMC; TMC domain
Nucleotide Protein
Heading Accession and Version

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Research Materials