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EOMES eomesodermin [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 704711, updated on 17-Aug-2024

Summary

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Official Symbol
EOMESprovided by VGNC
Official Full Name
eomesoderminprovided by VGNC
Primary source
VGNC:VGNC:110368
See related
Ensembl:ENSMMUG00000064030
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See EOMES in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (20018480..20025222)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (184450408..184457148, complement)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106997141 Neighboring gene uncharacterized LOC106997147 Neighboring gene uncharacterized protein KIAA1143 pseudogene Neighboring gene 40S ribosomal protein S27-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in CD8-positive, alpha-beta T cell differentiation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endodermal cell fate specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mesoderm formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eomesodermin homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    20018480..20025222
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015132320.2 → XP_014987806.2  eomesodermin homolog isoform X1

    UniProtKB/TrEMBL
    A0A5F8A4F4
    Related
    ENSMMUP00000072238.1, ENSMMUT00000089758.1
    Conserved Domains (2) summary
    pfam00907
    Location:267 → 454
    T-box
    pfam16176
    Location:480 → 701
    T-box_assoc; T-box transcription factor-associated

  2. XM_015132321.2 → XP_014987807.2  eomesodermin homolog isoform X2

    Conserved Domains (2) summary
    pfam00907
    Location:267 → 454
    T-box
    pfam16176
    Location:461 → 682
    T-box_assoc; T-box transcription factor-associated
Nucleotide Protein
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